RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 WASHC2DQ5SRD0 308 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 MANEAQ5SRI9 462 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 C10orf62Q5T681 223 aaPredicted RBP8.93□□□□□ -0.98
HERC1-206ENST00000559996 ZNF793Q6ZN11 406 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 CHSY3Q70JA7 882 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 ASPGQ86U10 573 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 CACTIN-AS1Q8N1I8 211 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 METTL4Q8N3J2 472 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 AFAP1L2Q8N4X5 818 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 DTWD1Q8N5C7 304 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 GBP7Q8N8V2 638 aaPredicted RBP8.93□□□□□ -0.98
HERC1-206ENST00000559996 TRPV3Q8NET8 790 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 TTLQ8NG68 377 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.93□□□□□ -0.98
HERC1-206ENST00000559996 ACTRT2Q8TDY3 377 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 UTP15Q8TED0 518 aaKnown RBP8.93□□□□□ -0.98
HERC1-206ENST00000559996 C19orf60Q96EN9 201 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 QRFPRQ96P65 431 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 CCT7Q99832 543 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 TMEM120AQ9BXJ8 343 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 MRPL1Q9BYD6 325 aaKnown RBP8.93□□□□□ -0.98
HERC1-206ENST00000559996 TRIM55Q9BYV6 548 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 ELOVL6Q9H5J4 265 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 DLL3Q9NYJ7 618 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 VPS29Q9UBQ0 182 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 PLCL2Q9UPR0 1127 aa8.93□□□□□ -0.98
HERC1-206ENST00000559996 RUVBL1Q9Y265 456 aaKnown RBP8.93□□□□□ -0.98
HERC1-206ENST00000559996 TRPC5OSA6NMA1 111 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 SLC28A1O00337 649 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 SAP18O00422 153 aaKnown RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 RTCAO00442 366 aaKnown RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 PLPP1O14494 284 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 HGSO14964 777 aaPredicted RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 PEX11AO75192 247 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 RSL1D1O76021 490 aaKnown RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 TIAF1O95411 115 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 CCL4P13236 92 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 TPP2P29144 1249 aaPredicted RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 SERPINB1P30740 379 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 GRK3P35626 688 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 MC2RQ01718 297 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 DDX39BQ13838 428 aaKnown RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 RSPO4Q2I0M5 234 aaPredicted RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 KHDRBS2Q5VWX1 349 aaKnown RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 TMEM198Q66K66 360 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 MRM1Q6IN84 353 aaKnown RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 OGFOD2Q6N063 350 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 TMEM214Q6NUQ4 689 aaKnown RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 ABHD17CQ6PCB6 329 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 RBM44Q6ZP01 1051 aaKnown RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 PRSS41Q7RTY9 318 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 SPATA21Q7Z572 469 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 PDSS2Q86YH6 399 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 MARCH9Q86YJ5 346 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 HOMEZQ8IX15 550 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 DDIASQ8IXT1 998 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 KIRREL3Q8IZU9 778 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 SLC38A9Q8NBW4 561 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 PMEPA1Q969W9 287 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 REPS1Q96D71 796 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 CMTM7Q96FZ5 175 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 C10orf90Q96M02 699 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 TEFMQ96QE5 360 aaKnown RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 CCDC28BQ9BUN5 200 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 SORBS1Q9BX66 1292 aaKnown RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 SPRY4Q9C004 299 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 ZNF385DQ9H6B1 395 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 APMAPQ9HDC9 416 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 TMEM184BQ9Y519 407 aaPredicted RBP8.92□□□□□ -0.98
HERC1-206ENST00000559996 SCN3AQ9NY46 2000 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 PTPRBP23467 1997 aa8.92□□□□□ -0.98
HERC1-206ENST00000559996 WDFY3Q8IZQ1 3526 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 KNTC1P50748 2209 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 A0A0G2JND7 137 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 TMEM150CB9EJG8 249 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 AGRPO00253 132 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 ANKRD28O15084 1053 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 NDUFS4O43181 175 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 DIAPH2O60879 1101 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 EEDO75530 441 aaKnown RBP8.91□□□□□ -0.98
HERC1-206ENST00000559996 CRCPO75575 148 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 SCELO95171 688 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 CHEK2O96017 543 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 CDK4P11802 303 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 FGF5P12034 268 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 ITGAXP20702 1163 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 TACR1P25103 407 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 ETV5P41161 510 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 ZFP36L2P47974 494 aaKnown RBP8.91□□□□□ -0.98
HERC1-206ENST00000559996 ARFIP2P53365 341 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 ARFIP1P53367 373 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 DIO3P55073 304 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 SIM1P81133 766 aaPredicted RBP8.91□□□□□ -0.98
HERC1-206ENST00000559996 EMX2Q04743 252 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 RUNX2Q13950 521 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 SMU1Q2TAY7 513 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 AP5B1Q2VPB7 878 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 CCDC157Q569K6 752 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 TOR1AIP1Q5JTV8 583 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 PHF19Q5T6S3 580 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms