RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 RNF151Q2KHN1 245 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 SPATS1Q496A3 300 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 RAB41Q5JT25 222 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC2A7Q6PXP3 512 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ANKK1Q8NFD2 765 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ABRACLQ9P1F3 81 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 C19orf25Q9UFG5 118 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 TMX2Q9Y320 296 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ADCY10Q96PN6 1610 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 MSCO60682 206 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 DNAJB6O75190 326 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 TPPPO94811 219 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 TSFMP43897 325 aaKnown RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 CAPSQ13938 189 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 RAB35Q15286 201 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 EXOC3L2Q2M3D2 409 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 HSPBAP1Q96EW2 488 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 SEMA6CQ9H3T2 930 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 HAO2Q9NYQ3 351 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 POMPQ9Y244 141 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 TCAF1Q9Y4C2 921 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 H2BFMP0C1H6 154 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 AKR1C4P17516 323 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 PPP4CP60510 307 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ERVK-8P63133 956 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 RBM39Q14498 530 aaKnown RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZNF169Q14929 603 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 MFSD5Q6N075 450 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 TRMT61BQ9BVS5 477 aaKnown RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 FUNDC2Q9BWH2 189 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 CTPS2Q9NRF8 586 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ANKRD34BA5PLL1 514 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 FAM170BA6NMN3 283 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 PDHXO00330 501 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLITRK3O94933 977 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 GABRR2P28476 465 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ACTR1BP42025 376 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 SCNN1GP51170 649 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 IDO2Q6ZQW0 420 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 PLEKHG7Q6ZR37 379 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZFP82Q8N141 532 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 SUMF2Q8NBJ7 301 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR8K3Q8NH51 312 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC25A44Q96H78 314 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZBTB45Q96K62 511 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 UBXN10Q96LJ8 280 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZNF681Q96N22 645 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 PAPOLGQ9BWT3 736 aaKnown RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 KCND1Q9NSA2 647 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 TAS2R14Q9NYV8 317 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 KLHL13Q9P2N7 655 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 EPHA6Q9UF33 1036 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 UBE2Q2LH0YL09 131 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 CLDN5O00501 218 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 FAM155BO75949 473 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 GOT2P00505 430 aaKnown RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 BCHEP06276 602 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 BPIP17213 487 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 BDKRB2P30411 391 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 PIGZQ86VD9 579 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 NUDT13Q86X67 352 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 YIPF4Q9BSR8 244 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 GBA2Q9HCG7 927 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 DDX4Q9NQI0 724 aaKnown RBP13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 DEC1Q9P2X7 70 aa13.44□□□□□ -0.26
CSPG4P12-202ENST00000559989 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 PAHP00439 452 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 TAF1AQ15573 450 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 SIDT2Q8NBJ9 832 aaKnown RBP13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 RELTQ969Z4 430 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 IL20RAQ9UHF4 553 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 A0A1W2PQH9 124 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 KHNYNO15037 678 aaKnown RBP13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 POP4O95707 220 aaKnown RBP13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 CSNK2A2P19784 350 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 CORO1AP31146 461 aaKnown RBP13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 EEFSECP57772 596 aaKnown RBP13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 HABP2Q14520 560 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 PTCHD3Q3KNS1 767 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 ADGRD1Q6QNK2 874 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 CAMKVQ8NCB2 501 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 LRRN4CLQ8ND94 238 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 CPT1BQ92523 772 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR4K3Q96R72 315 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 TEX10Q9NXF1 929 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 CA5BQ9Y2D0 317 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 PCDHGA5Q9Y5G8 931 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR6C75A6NL08 312 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 CLIC1O00299 241 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 ABCB7O75027 752 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 APOA2P02652 100 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 EPHX1P07099 455 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC2A5P22732 501 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 PTGER3P43115 390 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 CD97P48960 835 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 KIAA0319Q5VV43 1072 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 TOP6BLQ8N6T0 577 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 PTGES2Q9H7Z7 377 aa13.43□□□□□ -0.26
CSPG4P12-202ENST00000559989 HHATLQ9HCP6 504 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms