RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 NKAPQ8N5F7 415 aaKnown RBP16.69■□□□□ 0.26
HDDC3-205ENST00000559898 PYROXD1Q8WU10 500 aa16.69■□□□□ 0.26
HDDC3-205ENST00000559898 METTL21AQ8WXB1 218 aa16.69■□□□□ 0.26
HDDC3-205ENST00000559898 RHBDF1Q96CC6 855 aa16.69■□□□□ 0.26
HDDC3-205ENST00000559898 SMIM10Q96HG1 83 aa16.69■□□□□ 0.26
HDDC3-205ENST00000559898 EGFL8Q99944 293 aa16.69■□□□□ 0.26
HDDC3-205ENST00000559898 SLX1AQ9BQ83 275 aa16.69■□□□□ 0.26
HDDC3-205ENST00000559898 GPAMQ9HCL2 828 aa16.69■□□□□ 0.26
HDDC3-205ENST00000559898 ANKRD10Q9NXR5 420 aa16.69■□□□□ 0.26
HDDC3-205ENST00000559898 ZFP69BQ9UJL9 534 aa16.69■□□□□ 0.26
HDDC3-205ENST00000559898 ASB1Q9Y576 335 aa16.69■□□□□ 0.26
HDDC3-205ENST00000559898 TCRBV9S1A1TA0A576 114 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 WDR47O94967 919 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 MST1P26927 711 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 DLG1Q12959 904 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 ABRAXAS2Q15018 415 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 TOR1AIP1Q5JTV8 583 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 PAPD4Q6PIY7 484 aaKnown RBP16.68■□□□□ 0.26
HDDC3-205ENST00000559898 SYT10Q6XYQ8 523 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 RIPOR1Q6ZS17 1223 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 VN1R5Q7Z5H4 357 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 CRLF3Q8IUI8 442 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.68■□□□□ 0.26
HDDC3-205ENST00000559898 ATL1Q8WXF7 558 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 SIGLEC12Q96PQ1 595 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 SLC6A16Q9GZN6 736 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.68■□□□□ 0.26
HDDC3-205ENST00000559898 RHBGQ9H310 441 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 PELI2Q9HAT8 420 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 AGPAT4Q9NRZ5 378 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 STMN3Q9NZ72 180 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 WHRNQ9P202 907 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 CTNNAL1Q9UBT7 734 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 DYRK1BQ9Y463 629 aa16.68■□□□□ 0.26
HDDC3-205ENST00000559898 DYTNA2CJ06 578 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 PABPN1LA6NDY0 278 aaKnown RBP16.67■□□□□ 0.26
HDDC3-205ENST00000559898 FAM187AA6NFU0 413 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 FAM159BA6NKW6 160 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 UQCRHP07919 91 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 FHP07954 510 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 MAOAP21397 527 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 HNRNPH1P31943 449 aaKnown RBP16.67■□□□□ 0.26
HDDC3-205ENST00000559898 PWP1Q13610 501 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 TGFBIQ15582 683 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 NSDHLQ15738 373 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 C4orf17Q53FE4 359 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 ZNF787Q6DD87 383 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 PLAG1Q6DJT9 500 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 RPUSD3Q6P087 351 aaKnown RBP16.67■□□□□ 0.26
HDDC3-205ENST00000559898 SLCO4C1Q6ZQN7 724 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 TMEM52Q8NDY8 209 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 PLPP5Q8NEB5 264 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 FBXO25Q8TCJ0 367 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 NECTIN3Q9NQS3 549 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 RNF14Q9UBS8 474 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 SLC5A6Q9Y289 635 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 POLEQ07864 2286 aa16.67■□□□□ 0.26
HDDC3-205ENST00000559898 A8MUA0 341 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 TGFBR3LH3BV60 316 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 CCDC166P0CW27 439 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 EDN3P14138 238 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 CD1DP15813 335 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 AHRP35869 848 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 HNRNPFP52597 415 aaKnown RBP16.66■□□□□ 0.26
HDDC3-205ENST00000559898 PLTPP55058 493 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 CDKL1Q00532 357 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 RUNX2Q13950 521 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 ELOAQ14241 798 aaKnown RBP16.66■□□□□ 0.26
HDDC3-205ENST00000559898 SLBPQ14493 270 aaKnown RBP eCLIP16.66■□□□□ 0.26
HDDC3-205ENST00000559898 USP10Q14694 798 aaKnown RBP16.66■□□□□ 0.26
HDDC3-205ENST00000559898 HERC3Q15034 1050 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 ZNF468Q5VIY5 522 aaPredicted RBP16.66■□□□□ 0.26
HDDC3-205ENST00000559898 H3F3CQ6NXT2 135 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 FAM180AQ6UWF9 173 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 CMC1Q7Z7K0 106 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 KLHDC8AQ8IYD2 350 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 CA13Q8N1Q1 262 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 TBC1D20Q96BZ9 403 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 GPR22Q99680 433 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 RBBP8Q99708 897 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 DERL2Q9GZP9 239 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 KCNK13Q9HB14 408 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 OLAHQ9NV23 265 aa16.66■□□□□ 0.26
HDDC3-205ENST00000559898 TRAV17A0A0B4J275 112 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 ESYT3A0FGR9 886 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 OR5H15A6NDH6 313 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 MAGEB17A8MXT2 336 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 ZNHIT1O43257 154 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 LRRTM2O43300 516 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 C1GALT1C1LP0DN25 315 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 EPORP19235 508 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 CD22P20273 847 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 CASQ1P31415 396 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 HSPA7P48741 367 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 OR4D2P58180 307 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 SLC26A5P58743 744 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 SLC7A5Q01650 507 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 POU4F1Q01851 419 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 RGS1Q08116 209 aa16.65■□□□□ 0.26
HDDC3-205ENST00000559898 TUBA3CQ13748 450 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms