RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 KCNK13Q9HB14 408 aa16.73■□□□□ 0.27
TPM1-218ENST00000559281 OR2W5A6NFC9 320 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 PSMD12O00232 456 aaPredicted RBP16.72■□□□□ 0.27
TPM1-218ENST00000559281 CDC123O75794 336 aaPredicted RBP16.72■□□□□ 0.27
TPM1-218ENST00000559281 WDR47O94967 919 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 RASAL1O95294 804 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 LDLRP01130 860 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 CRYABP02511 175 aaKnown RBP16.72■□□□□ 0.27
TPM1-218ENST00000559281 SERPINA6P08185 405 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 ZNF888P0CJ79 500 aaPredicted RBP16.72■□□□□ 0.27
TPM1-218ENST00000559281 C1GALT1C1LP0DN25 315 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 PER3P56645 1201 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 OR4D2P58180 307 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 TAS2R50P59544 299 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 STXBP1P61764 594 aaKnown RBP16.72■□□□□ 0.27
TPM1-218ENST00000559281 RHAGQ02094 409 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 SFT2D3Q587I9 215 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 CDKL4Q5MAI5 379 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 ACER2Q5QJU3 275 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 H3F3CQ6NXT2 135 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 PAPD4Q6PIY7 484 aaKnown RBP16.72■□□□□ 0.27
TPM1-218ENST00000559281 DNAJB8Q8NHS0 232 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 UTP15Q8TED0 518 aaKnown RBP16.72■□□□□ 0.27
TPM1-218ENST00000559281 RHBDF1Q96CC6 855 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 SLX1AQ9BQ83 275 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 MCMBPQ9BTE3 642 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 RBCK1Q9BYM8 510 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 SLC6A16Q9GZN6 736 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 RAB17Q9H0T7 212 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 CNOT10Q9H9A5 744 aaKnown RBP16.72■□□□□ 0.27
TPM1-218ENST00000559281 MMP25Q9NPA2 562 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 LANCL2Q9NS86 450 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 MTO1Q9Y2Z2 717 aaKnown RBP16.72■□□□□ 0.27
TPM1-218ENST00000559281 MDC1Q14676 2089 aaKnown RBP16.72■□□□□ 0.27
TPM1-218ENST00000559281 DOCK10Q96BY6 2186 aa16.72■□□□□ 0.27
TPM1-218ENST00000559281 FANCGO15287 622 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 RAD51CO43502 376 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 PRAMEF2O60811 474 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 B4GALT2O60909 372 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 F10P00742 488 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 STMN1P16949 149 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 GSTM2P28161 218 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 HPDP32754 393 aaPredicted RBP16.71■□□□□ 0.27
TPM1-218ENST00000559281 GP5P40197 560 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 HNF4AP41235 474 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 RAB8AP61006 207 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 ATP6V0D1P61421 351 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 TGFBIQ15582 683 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 MEP1AQ16819 746 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 GPSM1Q86YR5 675 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 KLHDC8AQ8IYD2 350 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 KRT78Q8N1N4 520 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 SLC5A8Q8N695 610 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 ANKRD53Q8N9V6 530 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 ARMC2Q8NEN0 867 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 SEC16BQ96JE7 1060 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 PTCHD1Q96NR3 888 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 PITHD1Q9GZP4 211 aaPredicted RBP16.71■□□□□ 0.27
TPM1-218ENST00000559281 SPNS1Q9H2V7 528 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 SMYD2Q9NRG4 433 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 GPRC5BQ9NZH0 403 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 OSGIN2Q9Y236 505 aa16.71■□□□□ 0.27
TPM1-218ENST00000559281 SPENQ96T58 3664 aaKnown RBP16.7■□□□□ 0.26
TPM1-218ENST00000559281 NUP210LQ5VU65 1888 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 TCRBV9S1A1TA0A576 114 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 A1L4Q6 167 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 E2F3O00716 465 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 CDK2AP1O14519 115 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 PRMT3O60678 531 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 PIAS1O75925 651 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 CCDC166P0CW27 439 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 RNH1P13489 461 aaKnown RBP16.7■□□□□ 0.26
TPM1-218ENST00000559281 SPRP35270 261 aaPredicted RBP16.7■□□□□ 0.26
TPM1-218ENST00000559281 GDF5P43026 501 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 PLTPP55058 493 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 ETF1P62495 437 aaKnown RBP16.7■□□□□ 0.26
TPM1-218ENST00000559281 SULT1C3Q6IMI6 304 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 TMIGD1Q6UXZ0 262 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 MAMDC2Q7Z304 686 aaPredicted RBP16.7■□□□□ 0.26
TPM1-218ENST00000559281 CTAGE3PQ8IX95 158 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 SHISA5Q8N114 240 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 HORMAD2Q8N7B1 307 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 NR4A3Q92570 626 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 FAR2Q96K12 515 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 GPR22Q99680 433 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 RBBP8Q99708 897 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 UTP23Q9BRU9 249 aaKnown RBP16.7■□□□□ 0.26
TPM1-218ENST00000559281 PHACTR1Q9C0D0 580 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 CAB39LQ9H9S4 337 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 WWOXQ9NZC7 414 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 POLEQ07864 2286 aa16.7■□□□□ 0.26
TPM1-218ENST00000559281 A0A088AWK7 358 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 A0A1B0GUH1 482 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 NCF1BA6NI72 391 aaPredicted RBP16.69■□□□□ 0.26
TPM1-218ENST00000559281 FAM159BA6NKW6 160 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 NCF1CA8MVU1 366 aaPredicted RBP16.69■□□□□ 0.26
TPM1-218ENST00000559281 CXorf49A8MYA2 514 aaPredicted RBP16.69■□□□□ 0.26
TPM1-218ENST00000559281 CLGNO14967 610 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 LRRTM2O43300 516 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 RNF224P0DH78 156 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms