RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 THEMIS2Q5TEJ8 643 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 FAAH2Q6GMR7 532 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 FRMPD2BQ6IN97 320 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 LRRC8BQ6P9F7 803 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 IQCKQ8N0W5 287 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 OR4N4Q8N0Y3 316 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 ZADH2Q8N4Q0 377 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 PRELID2Q8N945 189 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 Q8NA96 180 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 PPFIBP2Q8ND30 876 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 OR2L3Q8NG85 312 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 LPGAT1Q92604 370 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 MAGOHBQ96A72 148 aaKnown RBP6.99□□□□□ -1.29
SPG11-213ENST00000558988 RAD51AP1Q96B01 352 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 PTERQ96BW5 349 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 MS4A14Q96JA4 679 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 CABS1Q96KC9 395 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 MESP1Q9BRJ9 268 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 DPH7Q9BTV6 452 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 SLC29A3Q9BZD2 475 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 P2RY12Q9H244 342 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 CCDC68Q9H2F9 335 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 ZBTB20Q9HC78 741 aaPredicted RBP6.99□□□□□ -1.29
SPG11-213ENST00000558988 MLXIPLQ9NP71 852 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 FBXO6Q9NRD1 293 aaPredicted RBP6.99□□□□□ -1.29
SPG11-213ENST00000558988 SLC22A11Q9NSA0 550 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 GALPQ9UBC7 116 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 DRG1Q9Y295 367 aaKnown RBP6.99□□□□□ -1.29
SPG11-213ENST00000558988 MAD1L1Q9Y6D9 718 aa6.99□□□□□ -1.29
SPG11-213ENST00000558988 ESPL1Q14674 2120 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 MDC1Q14676 2089 aaKnown RBP6.98□□□□□ -1.29
SPG11-213ENST00000558988 HYKKA2RU49 373 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 ARHGEF33A8MVX0 844 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 AGPSO00116 658 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 AP3B1O00203 1094 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 KIF5CO60282 957 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 CD63P08962 238 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 RNF224P0DH78 156 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 PIM1P11309 404 aaPredicted RBP6.98□□□□□ -1.29
SPG11-213ENST00000558988 GP1BBP13224 206 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 TPSB2P20231 275 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 RPS3P23396 243 aaKnown RBP eCLIP6.98□□□□□ -1.29
SPG11-213ENST00000558988 CMPK1P30085 196 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 SARNPP82979 210 aaKnown RBP6.98□□□□□ -1.29
SPG11-213ENST00000558988 OCA2Q04671 838 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 CTBP1Q13363 440 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 MYBPC3Q14896 1274 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 TPSAB1Q15661 275 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.98□□□□□ -1.29
SPG11-213ENST00000558988 TCTE1Q5JU00 501 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 RNF187Q5TA31 235 aaPredicted RBP6.98□□□□□ -1.29
SPG11-213ENST00000558988 MFSD4BQ5TF39 518 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 PAPD7Q5XG87 772 aaKnown RBP6.98□□□□□ -1.29
SPG11-213ENST00000558988 NEPROQ6NW34 567 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 TTC27Q6P3X3 843 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 C4orf22Q6V702 233 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 LINC00696Q6ZRV3 163 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 OVCH1Q7RTY7 1134 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 LRRC6Q86X45 466 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 DENND6AQ8IWF6 608 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 LRRC8AQ8IWT6 810 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 KLHL36Q8N4N3 616 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 TRIM58Q8NG06 486 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 MAGEC3Q8TD91 643 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 DENND1AQ8TEH3 1009 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 TM9SF4Q92544 642 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 PEX13Q92968 403 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 PNPLA2Q96AD5 504 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 C8orf44Q96CB5 159 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 THOC3Q96J01 351 aaKnown RBP6.98□□□□□ -1.29
SPG11-213ENST00000558988 MAGEB10Q96LZ2 347 aaPredicted RBP6.98□□□□□ -1.29
SPG11-213ENST00000558988 BIRC8Q96P09 236 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 IP6K3Q96PC2 410 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 SMAD5Q99717 465 aaKnown RBP6.98□□□□□ -1.29
SPG11-213ENST00000558988 CRB3Q9BUF7 120 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 KIFC1Q9BW19 673 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 SLC6A20Q9NP91 592 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 MRPS30Q9NP92 439 aaKnown RBP6.98□□□□□ -1.29
SPG11-213ENST00000558988 ASF1BQ9NVP2 202 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 TAC3Q9UHF0 121 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 B3GNT3Q9Y2A9 372 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 PPP2R2CQ9Y2T4 447 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 CSAG2Q9Y5P2 127 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 ASH1LQ9NR48 2969 aaKnown RBP6.98□□□□□ -1.29
SPG11-213ENST00000558988 SHANK1Q9Y566 2161 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 PTPN13Q12923 2485 aa6.98□□□□□ -1.29
SPG11-213ENST00000558988 ANKRD12Q6UB98 2062 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 H0YGG7 62 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 H3BMM5 538 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 SOCS6O14544 535 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 MAP2K7O14733 419 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 USP1O94782 785 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 F10P00742 488 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 IGHEP01854 428 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 CATP04040 527 aaKnown RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 ADH4P08319 380 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 ANXA5P08758 320 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 PKMP14618 531 aaKnown RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 OGNP20774 298 aaKnown RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 FBLP22087 321 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms