RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 CEACAM8P31997 349 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-206ENST00000558739 RPA3P35244 121 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-206ENST00000558739 NR2C2P49116 596 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 DNASE1L1P49184 302 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 MAN2A2P49641 1150 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 MPP1Q00013 466 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 SORDQ00796 357 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 FOXO1Q12778 655 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 TNK1Q13470 666 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 TRIM14Q14142 442 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 NDUFA9Q16795 377 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 ACSF3Q4G176 576 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-206ENST00000558739 ALKBH5Q6P6C2 394 aaKnown RBP10.99□□□□□ -0.65
SMAD3-206ENST00000558739 LDB1Q86U70 411 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-206ENST00000558739 SMPDL3BQ92485 455 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 C19orf43Q9BQ61 176 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 SLC6A15Q9H2J7 730 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 ANO10Q9NW15 660 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 SLC2A6Q9UGQ3 507 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 TRHDEQ9UKU6 1024 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 ERVK-11Q9UQG0 969 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 NAALAD2Q9Y3Q0 740 aa10.99□□□□□ -0.65
SMAD3-206ENST00000558739 SH3D21A4FU49 640 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 FAM47E-STBD1D6RA91 191 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 CDK2AP1O14519 115 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 B4GALT2O60909 372 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 OR2J2O76002 312 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 APOA4P06727 396 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 FHP07954 510 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 COILP38432 576 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-206ENST00000558739 SOX3P41225 446 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 NFKBIBQ15653 356 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 STX1AQ16623 288 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 ZNF750Q32MQ0 723 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 SASS6Q6UVJ0 657 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 ZNF534Q76KX8 674 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 KIF18BQ86Y91 864 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 OR13J1Q8NGT2 312 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 SYN2Q92777 582 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-206ENST00000558739 SARAFQ96BY9 339 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 LRRC46Q96FV0 321 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 GSX2Q9BZM3 304 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 EPB41L4BQ9H329 900 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 LDAHQ9H6V9 325 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 ARNT2Q9HBZ2 717 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 YAE1D1Q9NRH1 226 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 TUBA8Q9NY65 449 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-206ENST00000558739 FOXD3Q9UJU5 478 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-206ENST00000558739 FBXW2Q9UKT8 454 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 SH2B3Q9UQQ2 575 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 PCDHA3Q9Y5H8 950 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 WIF1Q9Y5W5 379 aa10.98□□□□□ -0.65
SMAD3-206ENST00000558739 TRGV5A0A0B4J1U4 118 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 MROH6A6NGR9 719 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 A8MVJ9 347 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 DEFB108AA8MXU0 73 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 H7BY64 318 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 TXNDC9O14530 226 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 SUSD5O60279 629 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 GOT2P00505 430 aaKnown RBP10.97□□□□□ -0.65
SMAD3-206ENST00000558739 RFPL3SP0C7P2 107 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 PKMP14618 531 aaKnown RBP10.97□□□□□ -0.65
SMAD3-206ENST00000558739 SSR4P51571 173 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 MYL5Q02045 173 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 PRDX1Q06830 199 aaKnown RBP10.97□□□□□ -0.65
SMAD3-206ENST00000558739 NAA25Q14CX7 972 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 NDUFAF5Q5TEU4 345 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 IL20RBQ6UXL0 311 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 ABHD13Q7L211 337 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 RAB42Q8N4Z0 105 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 P3H4Q92791 437 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 FAM136AQ96C01 138 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 DACH2Q96NX9 599 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 PRAP1Q96NZ9 151 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 HS3ST6Q96QI5 342 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 SECISBP2Q96T21 854 aaKnown RBP10.97□□□□□ -0.65
SMAD3-206ENST00000558739 FAM118BQ9BPY3 351 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 EXO5Q9H790 373 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 HPF1Q9NWY4 346 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 GALNT8Q9NY28 637 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 SPATA7Q9P0W8 599 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 UVRAGQ9P2Y5 699 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 ZNF629Q9UEG4 869 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-206ENST00000558739 MED12LQ86YW9 2145 aa10.97□□□□□ -0.65
SMAD3-206ENST00000558739 FREM1Q5H8C1 2179 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 ALPK2Q86TB3 2170 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 IGKV3D-11A0A0A0MRZ8 115 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 ZNF354AO60765 605 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-206ENST00000558739 SOX30O94993 753 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 GOSR1O95249 250 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 GABRA1P14867 456 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 PPP2R1BP30154 601 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 TMED2Q15363 201 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 ACKR1Q16570 336 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 CHRFAM7AQ494W8 412 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 ANKRD20A2Q5SQ80 823 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 ANKRD20A1Q5TYW2 823 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 ANKRD20A3Q5VUR7 823 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 ITPRIPL1Q6GPH6 555 aa10.96□□□□□ -0.65
SMAD3-206ENST00000558739 KIAA0930Q6ICG6 404 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms