RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 RFC2P35250 354 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 GP5P40197 560 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 NAMPTP43490 491 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SERPINB10P48595 397 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 ALDH7A1P49419 539 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 RPL14P50914 215 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 LIMK1P53667 647 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 LIMK2P53671 638 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 PKNOX1P55347 436 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SRP54P61011 504 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 PPP2R2BQ00005 443 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 ROR1Q01973 937 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 PRKCDQ05655 676 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 RAD51Q06609 339 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 FOXM1Q08050 763 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 RIPPLY1Q0D2K3 151 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 FCHO2Q0JRZ9 810 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 EPS8Q12929 822 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 PRKAA1Q13131 559 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 FADDQ13158 208 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 KRR1Q13601 381 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 CUL2Q13617 745 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SQLEQ14534 574 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 PSMD5Q16401 504 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 YIF1BQ5BJH7 314 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SYT6Q5T7P8 510 aaPredicted RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 PXDC1Q5TGL8 231 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SEL1L3Q68CR1 1132 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 REP15Q6BDI9 236 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 PRMT9Q6P2P2 845 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 DNAJC24Q6P3W2 148 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SLC39A4Q6P5W5 647 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 XKRXQ6PP77 449 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 ZNF474Q6S9Z5 364 aaPredicted RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 ZYG11AQ6WRX3 759 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SLC22A16Q86VW1 577 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 RALGPS2Q86X27 583 aaPredicted RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 ERO1BQ86YB8 467 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 CBWD2Q8IUF1 395 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 LURAP1LQ8IV03 231 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 CTAGE3PQ8IX95 158 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SYTL1Q8IYJ3 562 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 HACE1Q8IYU2 909 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 ZCCHC7Q8N3Z6 543 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 CBR4Q8N4T8 237 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 DHRSXQ8N5I4 330 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 TMCO5AQ8N6Q1 288 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 TDRD5Q8NAT2 981 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 ANKRD52Q8NB46 1076 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 OR13J1Q8NGT2 312 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 URGCPQ8TCY9 931 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 ZFP90Q8TF47 636 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 CAPSLQ8WWF8 208 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 ARNTL2Q8WYA1 636 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 LPGAT1Q92604 370 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.13□□□□□ -1.91
HERC1-203ENST00000558532 VPS33AQ96AX1 596 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 YIPF6Q96EC8 236 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 TMEM41AQ96HV5 264 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 ELMO2Q96JJ3 720 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 CEP170P1Q96L14 293 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 GPR78Q96P69 363 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 RIT2Q99578 217 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 RBBP8Q99708 897 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 CPNE1Q99829 537 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SLC39A3Q9BRY0 314 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 LXNQ9BS40 222 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 NTPCRQ9BSD7 190 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 FEM1AQ9BSK4 669 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 NAT9Q9BTE0 207 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 FUNDC2Q9BWH2 189 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 TRIM15Q9C019 465 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 LHPPQ9H008 270 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 ILKAPQ9H0C8 392 aaPredicted RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 ZNF700Q9H0M5 742 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 TRPV6Q9H1D0 765 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 UPF3AQ9H1J1 476 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 ACAD9Q9H845 621 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 LRRC40Q9H9A6 602 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SYTL2Q9HCH5 934 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 VAT1LQ9HCJ6 419 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 CNGB3Q9NQW8 809 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 FBXO28Q9NVF7 368 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 INTS10Q9NVR2 710 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.13□□□□□ -1.91
HERC1-203ENST00000558532 USE1Q9NZ43 259 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 TMEM216Q9P0N5 145 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 ACTR3BQ9P1U1 418 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 UBA2Q9UBT2 640 aaPredicted RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 KLQ9UEF7 1012 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 OSGIN1Q9UJX0 560 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 NUP50Q9UKX7 468 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 RABL2BQ9UNT1 228 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 RBMX2Q9Y388 322 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 GRIP1Q9Y3R0 1128 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 STYXL1Q9Y6J8 313 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 A0A0G2JMZ2 1700 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 LRRC37A2A6NM11 1700 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 CKAP5Q14008 2032 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 A0A0G2JK05 382 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms