RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 DOHHQ9BU89 302 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 EFCAB11Q9BUY7 163 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 DUSP26Q9BV47 211 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 ZCCHC2Q9C0B9 1178 aaKnown RBP7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 CCDC90BQ9GZT6 254 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 TNKS2Q9H2K2 1166 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 FAM83DQ9H4H8 585 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 SP140LQ9H930 580 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 ZNF556Q9HAH1 456 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 SMURF2Q9HAU4 748 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 CPNE5Q9HCH3 593 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 RHBDL2Q9NX52 303 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 THUMPD1Q9NXG2 353 aaKnown RBP7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 SCHIP1Q9P0W5 487 aaPredicted RBP7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 FNDC3AQ9Y2H6 1198 aaKnown RBP7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 WDR37Q9Y2I8 494 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 SAMHD1Q9Y3Z3 626 aaKnown RBP7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 INSL5Q9Y5Q6 135 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 KCNE2Q9Y6J6 123 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 V9GYQ6 96 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 SPEGQ15772 3267 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 PIKFYVEQ9Y2I7 2098 aa7.02□□□□□ -1.29
MTHFD1-215ENST00000557370 MN1Q10571 1320 aaPredicted RBP7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 HELZ2Q9BYK8 2649 aaKnown RBP7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 TSPAN11A1L157 253 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 MGAT4DA6NG13 374 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 HIDE1A8MVS5 230 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 PTGES3LE9PB15 166 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 E9PQ18 207 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SCAMP3O14828 347 aaKnown RBP7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SCAMP2O15127 329 aaKnown RBP7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ZSCAN9O15535 394 aaPredicted RBP7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 GREM1O60565 184 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 LILRB5O75023 590 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 FAM20BO75063 409 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ATG13O75143 517 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 PSIP1O75475 530 aaKnown RBP7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SNX4O95219 450 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SEC24AO95486 1093 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 MT-ND1P03886 318 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 GSNP06396 782 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 GLULP15104 373 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ENGP17813 658 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 HTR1BP28222 390 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 VIPR1P32241 457 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 CCR7P32248 378 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 NOVA1P51513 510 aaKnown RBP7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SGSHP51688 502 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 PPP5CP53041 499 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SMIM11AP58511 58 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 CTBSQ01459 385 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 CDC20Q12834 499 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 NPRL3Q12980 569 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 CHIT1Q13231 466 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ITGADQ13349 1161 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 GTF2H3Q13889 308 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 CLCA4Q14CN2 919 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 MAD2L1BPQ15013 274 aaPredicted RBP7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 OXA1LQ15070 435 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 CTF1Q16619 201 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ZNF630Q2M218 657 aaPredicted RBP7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ZNF181Q2M3W8 571 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ZNF284Q2VY69 593 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 PTCHD3Q3KNS1 767 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SGO1Q5FBB7 561 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 FBXO48Q5FWF7 155 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 LRRC66Q68CR7 880 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 C22orf39Q6P5X5 142 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 XKR5Q6UX68 686 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 GDPD4Q6W3E5 623 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 GDPGP1Q6ZNW5 385 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ZNF621Q6ZSS3 439 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 USP43Q70EL4 1123 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 IKBIPQ70UQ0 350 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SLCO6A1Q86UG4 719 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 NLRP8Q86W28 1048 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 TRIM69Q86WT6 500 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ZSWIM9Q86XI8 627 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 PLD3Q8IV08 490 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ZZZ3Q8IYH5 903 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 CHPFQ8IZ52 775 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SYNPOQ8N3V7 929 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 LINC00471Q8N535 108 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 OXR1Q8N573 874 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SLC15A4Q8N697 577 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 CLDN19Q8N6F1 224 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 KRTCAP2Q8N6L1 136 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 DCBLD1Q8N8Z6 715 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ZNF540Q8NDQ6 660 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 GPR26Q8NDV2 337 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SETD7Q8WTS6 366 aaKnown RBP7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 RASSF5Q8WWW0 418 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 SLC38A4Q969I6 547 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 TMEM159Q96B96 161 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 WDR34Q96EX3 536 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 TSSK3Q96PN8 268 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 MAPKAP1Q9BPZ7 522 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 BOCQ9BWV1 1114 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 ITPAQ9BY32 194 aa7.01□□□□□ -1.29
MTHFD1-215ENST00000557370 TM6SF2Q9BZW4 377 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms