RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 PSMD12O00232 456 aaPredicted RBP9.56□□□□□ -0.88
RDH11-210ENST00000557331 RDH16O75452 317 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 C8GP07360 202 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 ALOX12P18054 663 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 ACVR2AP27037 513 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 PTGER1P34995 402 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 ZFP36L2P47974 494 aaKnown RBP9.56□□□□□ -0.88
RDH11-210ENST00000557331 CLCN2P51788 898 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 CLCN7P51798 805 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 ITGA8P53708 1063 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 HSF1Q00613 529 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 PMPCAQ10713 525 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 KIF5AQ12840 1032 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 SKOR2Q2VWA4 1001 aaPredicted RBP9.56□□□□□ -0.88
RDH11-210ENST00000557331 CMPK2Q5EBM0 449 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 NEPROQ6NW34 567 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 DRICH1Q6PGQ1 229 aaPredicted RBP9.56□□□□□ -0.88
RDH11-210ENST00000557331 MICALCLQ6ZW33 695 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 FGD2Q7Z6J4 655 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 KIAA1328Q86T90 577 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 BIVMQ86UB2 503 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 SLC22A16Q86VW1 577 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 PLD3Q8IV08 490 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 CYP4Z2PQ8N1L4 340 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 PRELID2Q8N945 189 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 MFSD9Q8NBP5 474 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 OR5M3Q8NGP4 307 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 GABPB2Q8TAK5 448 aaPredicted RBP9.56□□□□□ -0.88
RDH11-210ENST00000557331 CALML6Q8TD86 181 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 MBD6Q96DN6 1003 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 PEX11GQ96HA9 241 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 HES6Q96HZ4 224 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 PTCHD1Q96NR3 888 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 CCDC77Q9BR77 488 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 PRDM9Q9NQV7 894 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 B4GALT7Q9UBV7 327 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 ST6GALNAC2Q9UJ37 374 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 SOX13Q9UN79 622 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 YARS2Q9Y2Z4 477 aaKnown RBP9.56□□□□□ -0.88
RDH11-210ENST00000557331 DHRS7Q9Y394 339 aa9.56□□□□□ -0.88
RDH11-210ENST00000557331 NSD1Q96L73 2696 aaPredicted RBP9.56□□□□□ -0.88
RDH11-210ENST00000557331 CTAGE9A4FU28 777 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 KRT87PA6NCN2 255 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 TMEM200CA6NKL6 621 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 FAM90A27PA6NNH2 459 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 FAM171A2A8MVW0 826 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 SLC16A5O15375 505 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 HS6ST1O60243 411 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 CDC40O60508 579 aaKnown RBP eCLIP9.55□□□□□ -0.88
RDH11-210ENST00000557331 GALR3O60755 368 aaPredicted RBP9.55□□□□□ -0.88
RDH11-210ENST00000557331 WDR1O75083 606 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 AVILO75366 819 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 CTAG2O75638 210 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 GOSR1O95249 250 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 HIST1H2AGP0C0S8 130 aaPredicted RBP9.55□□□□□ -0.88
RDH11-210ENST00000557331 HIST1H2ADP20671 130 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 NMBRP28336 390 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 IMPA1P29218 277 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 AHRP35869 848 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 RGS4P49798 205 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 CCR8P51685 355 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 TBL3Q12788 808 aaKnown RBP9.55□□□□□ -0.88
RDH11-210ENST00000557331 SP140Q13342 867 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 THOC5Q13769 683 aaKnown RBP9.55□□□□□ -0.88
RDH11-210ENST00000557331 CCNG2Q16589 344 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 PHKG1Q16816 387 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 LCTLQ6UWM7 567 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 B3GNT6Q6ZMB0 384 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 UBE2R2Q712K3 238 aaPredicted RBP9.55□□□□□ -0.88
RDH11-210ENST00000557331 SLC26A11Q86WA9 606 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 MARVELD2Q8N4S9 558 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 RNF10Q8N5U6 811 aaKnown RBP9.55□□□□□ -0.88
RDH11-210ENST00000557331 KCT2Q8NC54 265 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 PPFIBP2Q8ND30 876 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 B3GNT7Q8NFL0 401 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 ABHD11Q8NFV4 315 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 GOT1L1Q8NHS2 421 aaPredicted RBP9.55□□□□□ -0.88
RDH11-210ENST00000557331 MAIP1Q8WWC4 291 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 RMND5BQ96G75 393 aaPredicted RBP9.55□□□□□ -0.88
RDH11-210ENST00000557331 SEC16BQ96JE7 1060 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 HIST1H2AHQ96KK5 128 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 HIST1H2AJQ99878 128 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 H2AFJQ9BTM1 129 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 POLDIP3Q9BY77 421 aaKnown RBP9.55□□□□□ -0.88
RDH11-210ENST00000557331 TRIM5Q9C035 493 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 SYNPO2LQ9H987 977 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 PARVBQ9HBI1 364 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 HOMER3Q9NSC5 361 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 ABCF3Q9NUQ8 709 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 SAMD15Q9P1V8 674 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 FOXD3Q9UJU5 478 aaPredicted RBP9.55□□□□□ -0.88
RDH11-210ENST00000557331 PPIEQ9UNP9 301 aaKnown RBP9.55□□□□□ -0.88
RDH11-210ENST00000557331 TFR2Q9UP52 801 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 MMACHCQ9Y4U1 282 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 PCDHGB3Q9Y5G1 929 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 MAD1L1Q9Y6D9 718 aa9.55□□□□□ -0.88
RDH11-210ENST00000557331 FBN3Q75N90 2809 aa9.54□□□□□ -0.88
RDH11-210ENST00000557331 TCRBV16S1A1N1A0A5B0 115 aa9.54□□□□□ -0.88
RDH11-210ENST00000557331 TRBC2A0A5B9 178 aa9.54□□□□□ -0.88
RDH11-210ENST00000557331 NKX2-6A6NCS4 301 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms