RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 EEF1DP29692 281 aaKnown RBP14.93□□□□□ -0.02
TUBB3-213ENST00000557262 AHRP35869 848 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 SCTRP47872 440 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 SLC26A5P58743 744 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 OR1C1Q15619 314 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 KRTCAP3Q53RY4 240 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 SPINK14Q6IE38 97 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 TRMT10BQ6PF06 316 aaKnown RBP14.93□□□□□ -0.02
TUBB3-213ENST00000557262 ABHD13Q7L211 337 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 THOC6Q86W42 341 aaKnown RBP14.93□□□□□ -0.02
TUBB3-213ENST00000557262 SRRM1Q8IYB3 904 aaKnown RBP14.93□□□□□ -0.02
TUBB3-213ENST00000557262 LGI4Q8N135 537 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 HORMAD2Q8N7B1 307 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 UTP15Q8TED0 518 aaKnown RBP14.93□□□□□ -0.02
TUBB3-213ENST00000557262 ANKRD7Q92527 254 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 CCDC120Q96HB5 630 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 PWWP2AQ96N64 755 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 CDCP1Q9H5V8 836 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 RUBCNLQ9H714 662 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 KLHL1Q9NR64 748 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 TRMT1Q9NXH9 659 aaKnown RBP14.93□□□□□ -0.02
TUBB3-213ENST00000557262 ANKRD10Q9NXR5 420 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 CHMP2BQ9UQN3 213 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 KLF2Q9Y5W3 355 aaPredicted RBP14.93□□□□□ -0.02
TUBB3-213ENST00000557262 TEX264Q9Y6I9 313 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 GABRR3A8MPY1 467 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 PRMT3O60678 531 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 B4GALT2O60909 372 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 B3GALT4O96024 378 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 ZNF888P0CJ79 500 aaPredicted RBP14.92□□□□□ -0.02
TUBB3-213ENST00000557262 ST13P50502 369 aaKnown RBP14.92□□□□□ -0.02
TUBB3-213ENST00000557262 CASP6P55212 293 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 OLR1P78380 273 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 OC90Q02509 493 aaPredicted RBP14.92□□□□□ -0.02
TUBB3-213ENST00000557262 STEAP4Q687X5 459 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 SBSNQ6UWP8 590 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 MRGPRGQ86SM5 289 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 RPS19BP1Q86WX3 136 aaKnown RBP14.92□□□□□ -0.02
TUBB3-213ENST00000557262 ZNF808Q8N4W9 903 aaPredicted RBP14.92□□□□□ -0.02
TUBB3-213ENST00000557262 NKAPQ8N5F7 415 aaKnown RBP14.92□□□□□ -0.02
TUBB3-213ENST00000557262 TMEM178AQ8NBL3 297 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 TRPV3Q8NET8 790 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 ELP5Q8TE02 316 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 THAP3Q8WTV1 239 aaPredicted RBP14.92□□□□□ -0.02
TUBB3-213ENST00000557262 SCMH1Q96GD3 660 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 RUNDC3BQ96NL0 473 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 PTCHD1Q96NR3 888 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 AIF1LQ9BQI0 150 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 SPNS1Q9H2V7 528 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 PELI2Q9HAT8 420 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 IKZF3Q9UKT9 509 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 SLC22A14Q9Y267 594 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 DYRK1BQ9Y463 629 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 KCNE2Q9Y6J6 123 aa14.92□□□□□ -0.02
TUBB3-213ENST00000557262 ASPDHA6ND91 283 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 NDC80O14777 642 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 SLC19A2O60779 497 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 SP1P08047 785 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 SMIM10L1P0DMW3 83 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 ARL4CP56559 192 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 BTG2P78543 158 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 ALDH6A1Q02252 535 aaKnown RBP14.91□□□□□ -0.02
TUBB3-213ENST00000557262 FRG1Q14331 258 aaKnown RBP14.91□□□□□ -0.02
TUBB3-213ENST00000557262 RBBP5Q15291 538 aaKnown RBP14.91□□□□□ -0.02
TUBB3-213ENST00000557262 SLC25A25Q6KCM7 469 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 NXPE4Q6UWF7 544 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 QSOX2Q6ZRP7 698 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 KLHL7Q8IXQ5 586 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 CYP4X1Q8N118 509 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 ANKRD53Q8N9V6 530 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 SMIM10Q96HG1 83 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 GPR137Q96N19 417 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 TSNARE1Q96NA8 513 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 HES7Q9BYE0 225 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 SLC6A16Q9GZN6 736 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 ZFATQ9P243 1243 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 LRFN1Q9P244 771 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 SH3BGRL2Q9UJC5 107 aa14.91□□□□□ -0.02
TUBB3-213ENST00000557262 FAM227AF5H4B4 570 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 CDC7O00311 574 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 H2AFYO75367 372 aaKnown RBP14.9□□□□□ -0.02
TUBB3-213ENST00000557262 NEURL1O76050 574 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 SERPINA6P08185 405 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 PRF1P14222 555 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 ZNF37AP17032 561 aaPredicted RBP14.9□□□□□ -0.02
TUBB3-213ENST00000557262 SAT1P21673 171 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 TNFRSF8P28908 595 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 HNF4AP41235 474 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 ITGA8P53708 1063 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 RAB8AP61006 207 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 CDKL1Q00532 357 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 REEP5Q00765 189 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 DR1Q01658 176 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 MGAT5Q09328 741 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 HYAL2Q12891 473 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 NAA30Q147X3 362 aaPredicted RBP14.9□□□□□ -0.02
TUBB3-213ENST00000557262 PPP1R3AQ16821 1122 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 XKRXQ6PP77 449 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 RPTNQ6XPR3 784 aa14.9□□□□□ -0.02
TUBB3-213ENST00000557262 GALNTL5Q7Z4T8 443 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms