RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ATP5J2P56134 94 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 SIX1Q15475 284 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-220ENST00000557037 ACSF3Q4G176 576 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-220ENST00000557037 CT47A1Q5JQC4 288 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-220ENST00000557037 DENND5AQ6IQ26 1287 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 BHLHB9Q6PI77 547 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 C20orf204Q6ZNR8 217 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 KRT222Q8N1A0 295 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 ROBO4Q8WZ75 1007 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 PIK3IP1Q96FE7 263 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 FAM173AQ9BQD7 235 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 PIGQQ9BRB3 760 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 WDR83Q9BRX9 315 aaKnown RBP11.57□□□□□ -0.56
PSEN1-220ENST00000557037 REG4Q9BYZ8 158 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 C10orf88Q9H8K7 445 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 ANKHQ9HCJ1 492 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 SEMA4BQ9NPR2 832 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-220ENST00000557037 GALNT8Q9NY28 637 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 TUBA8Q9NY65 449 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-220ENST00000557037 TAC3Q9UHF0 121 aa11.57□□□□□ -0.56
PSEN1-220ENST00000557037 R3HDM2Q9Y2K5 976 aaKnown RBP11.57□□□□□ -0.56
PSEN1-220ENST00000557037 SVEP1Q4LDE5 3571 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 FREM3P0C091 2139 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 DEFB108AA8MXU0 73 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 ZNF487B1APH4 448 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 H7C0S8 307 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 HCN1O60741 890 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 EPPINO95925 133 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 XKR6Q5GH73 641 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 NBEAL2Q6ZNJ1 2754 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 VN1R4Q7Z5H5 301 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 ASB15Q8WXK1 588 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 HAUS1Q96CS2 278 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 ZBED6CLQ96FA7 236 aaPredicted RBP11.56□□□□□ -0.56
PSEN1-220ENST00000557037 PTCHD1Q96NR3 888 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 GBA3Q9H227 469 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 SLC6A15Q9H2J7 730 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 UTP6Q9NYH9 597 aaKnown RBP11.56□□□□□ -0.56
PSEN1-220ENST00000557037 AIPL1Q9NZN9 384 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 JKAMPQ9P055 326 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 CTTNBP2NLQ9P2B4 639 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 LIMA1Q9UHB6 759 aaKnown RBP11.56□□□□□ -0.56
PSEN1-220ENST00000557037 CDC42EP3Q9UKI2 254 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 NAALAD2Q9Y3Q0 740 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 DOCK7Q96N67 2140 aa11.56□□□□□ -0.56
PSEN1-220ENST00000557037 CCDC162PA2VCL2 907 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 PRKNO60260 465 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-220ENST00000557037 OR2J2O76002 312 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 FHP07954 510 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 MAOAP21397 527 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 CNR1P21554 472 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 CTSSP25774 331 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 MSNP26038 577 aaKnown RBP11.55□□□□□ -0.56
PSEN1-220ENST00000557037 TIMP3P35625 211 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 SOX3P41225 446 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 CPA2P48052 419 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 TRPC1P48995 793 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 CLCN2P51788 898 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 ADARP55265 1226 aaKnown RBP11.55□□□□□ -0.56
PSEN1-220ENST00000557037 OLR1P78380 273 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 BTG2P78543 158 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 FOXO1Q12778 655 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 TMED2Q15363 201 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 CLEC12BQ2HXU8 276 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 ICE2Q659A1 982 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 TMEM214Q6NUQ4 689 aaKnown RBP11.55□□□□□ -0.56
PSEN1-220ENST00000557037 FAM47EQ6ZV65 393 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 LUZP2Q86TE4 346 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 LACC1Q8IV20 430 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 CCDC50Q8IVM0 306 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.55□□□□□ -0.56
PSEN1-220ENST00000557037 KCT2Q8NC54 265 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 OR6P1Q8NGX9 317 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 GSDMBQ8TAX9 411 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 SMPDL3AQ92484 453 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 OR1F2PQ96R84 312 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 VAT1Q99536 393 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 C19orf43Q9BQ61 176 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 TBL1YQ9BQ87 522 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 BEX2Q9BXY8 128 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 SPATA7Q9P0W8 599 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 TRHDEQ9UKU6 1024 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 YARS2Q9Y2Z4 477 aaKnown RBP11.55□□□□□ -0.56
PSEN1-220ENST00000557037 DYSFO75923 2080 aa11.55□□□□□ -0.56
PSEN1-220ENST00000557037 NCKAP5O14513 1909 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 AOAHP28039 575 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 PSMB4P28070 264 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 FOXN2P32314 431 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 OPRM1P35372 400 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 NR2C2P49116 596 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 PRDX1Q06830 199 aaKnown RBP11.54□□□□□ -0.56
PSEN1-220ENST00000557037 POU6F1Q14863 301 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 KCTD11Q693B1 232 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 MFSD7Q6UXD7 560 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 PLEKHM3Q6ZWE6 761 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 BZW1Q7L1Q6 419 aaKnown RBP11.54□□□□□ -0.56
PSEN1-220ENST00000557037 APCDD1LQ8NCL9 501 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 FBXO15Q8NCQ5 510 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-220ENST00000557037 TBC1D20Q96BZ9 403 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms