RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 FOXL2P58012 376 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 SNRPNP63162 240 aaKnown RBP10.12□□□□□ -0.79
LINC00239-201ENST00000556973 MAT1AQ00266 395 aaKnown RBP10.12□□□□□ -0.79
LINC00239-201ENST00000556973 ATP1A4Q13733 1029 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 SYT16Q17RD7 645 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 TOR1AIP1Q5JTV8 583 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 PRSS41Q7RTY9 318 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 PPP1R32Q7Z5V6 425 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 PDSS2Q86YH6 399 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.12□□□□□ -0.79
LINC00239-201ENST00000556973 PTGR2Q8N8N7 351 aaPredicted RBP10.12□□□□□ -0.79
LINC00239-201ENST00000556973 ZCCHC10Q8TBK6 192 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 PHF21BQ96EK2 531 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 ABHD17AQ96GS6 310 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 ROPN1BQ9BZX4 212 aaPredicted RBP10.12□□□□□ -0.79
LINC00239-201ENST00000556973 SLC25A18Q9H1K4 315 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 KLHL31Q9H511 634 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 IPPKQ9H8X2 491 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 ROPN1Q9HAT0 212 aaPredicted RBP10.12□□□□□ -0.79
LINC00239-201ENST00000556973 P4HTMQ9NXG6 502 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 TMEM216Q9P0N5 145 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 ADGRE2Q9UHX3 823 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 C3orf18Q9UK00 162 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 RAB21Q9UL25 225 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 SEC16AO15027 2179 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 PCSK5Q92824 1860 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 LRRC14BA6NHZ5 514 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 IDSB3KWA1 339 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 SOCS6O14544 535 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 FFAR3O14843 346 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 GPR42O15529 346 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 CYC1P08574 325 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 SBK3P0C264 359 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 TAC1P20366 129 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 EEF1DP29692 281 aaKnown RBP10.11□□□□□ -0.79
LINC00239-201ENST00000556973 SERPINB1P30740 379 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 CCT5P48643 541 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 SOX8P57073 446 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 RAB8AP61006 207 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 RBBP7Q16576 425 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 ADPRMQ3LIE5 342 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 DEFB134Q4QY38 66 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 DCAF10Q5QP82 559 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 GRHL2Q6ISB3 625 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 MED27Q6P2C8 311 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 KIRREL2Q6UWL6 708 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 SH2D5Q6ZV89 423 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 GOLGA7Q7Z5G4 137 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 MRGPREQ86SM8 312 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 TMEM151BQ8IW70 566 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 LAS2Q8IYD9 372 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 PRSS58Q8IYP2 241 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 CYP4X1Q8N118 509 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 RIBC1Q8N443 379 aaPredicted RBP10.11□□□□□ -0.79
LINC00239-201ENST00000556973 CLEC1AQ8NC01 280 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 SRFBP1Q8NEF9 429 aaKnown RBP10.11□□□□□ -0.79
LINC00239-201ENST00000556973 EPS8L3Q8TE67 593 aaKnown RBP10.11□□□□□ -0.79
LINC00239-201ENST00000556973 CCT6BQ92526 530 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 ATP6V1E2Q96A05 226 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 GAL3ST3Q96A11 431 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 MS4A6EQ96DS6 147 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 FAR2Q96K12 515 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 OR1F2PQ96R84 312 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 NTMT1Q9BV86 223 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 NPLQ9BXD5 320 aaPredicted RBP10.11□□□□□ -0.79
LINC00239-201ENST00000556973 TRIM55Q9BYV6 548 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 SEMA4CQ9C0C4 833 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 ACTR8Q9H981 624 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 ATP13A2Q9NQ11 1180 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 HCN3Q9P1Z3 774 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 MKL2Q9ULH7 1088 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 TSC22D4Q9Y3Q8 395 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 PCDHGA11Q9Y5H2 935 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 HS3ST3B1Q9Y662 390 aa10.11□□□□□ -0.79
LINC00239-201ENST00000556973 MGAQ8IWI9 3026 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 A0A088AWK7 358 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 TLDC2A0PJX2 215 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 SMIM23A6NLE4 172 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 H0YIV9 168 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 OR7A17O14581 309 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 CHST10O43529 356 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 KLHL41O60662 606 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 GLRA3O75311 464 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 RDH16O75452 317 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 CEACAM4O75871 244 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 CLDN9O95484 217 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 TBX6O95947 436 aaPredicted RBP10.1□□□□□ -0.79
LINC00239-201ENST00000556973 ZNF10P21506 573 aaPredicted RBP10.1□□□□□ -0.79
LINC00239-201ENST00000556973 HNRNPH1P31943 449 aaKnown RBP10.1□□□□□ -0.79
LINC00239-201ENST00000556973 XCR1P46094 333 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 BTN3A2P78410 334 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 TGM3Q08188 693 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 IFFO1Q0D2I5 559 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 C19orf57Q0VDD7 668 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 CHAF1BQ13112 559 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 AIMP2Q13155 320 aaKnown RBP10.1□□□□□ -0.79
LINC00239-201ENST00000556973 TUBB8Q3ZCM7 444 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 CPZQ66K79 652 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 TCTN3Q6NUS6 607 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 TRIM40Q6P9F5 258 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms