RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 TMCO1Q9UM00 188 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 B8ZZF3 427 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 PCDH17O14917 1159 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 WFS1O76024 890 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 CYC1P08574 325 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 EPB42P16452 691 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 EMP2P54851 167 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 VSNL1P62760 191 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 DEFB134Q4QY38 66 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 CLEC1AQ8NC01 280 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 OR51Q1Q8NH59 317 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 UBLCP1Q8WVY7 318 aaPredicted RBP21.63■■□□□ 1.05
TDP1-216ENST00000556867 SCYL1Q96KG9 808 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 MRPL57Q9BQC6 102 aaKnown RBP21.63■■□□□ 1.05
TDP1-216ENST00000556867 SLC25A23Q9BV35 468 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 AICDAQ9GZX7 198 aa21.63■■□□□ 1.05
TDP1-216ENST00000556867 TNPO3Q9Y5L0 923 aaKnown RBP21.63■■□□□ 1.05
TDP1-216ENST00000556867 TNRC6AQ8NDV7 1962 aaKnown RBP21.62■■□□□ 1.05
TDP1-216ENST00000556867 A0A1W2PQ72 361 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 ZNF860A6NHJ4 632 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 CLEC3AO75596 197 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 HEXBP07686 556 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 SMIM10L1P0DMW3 83 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 XCR1P46094 333 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 STXBP1P61764 594 aaKnown RBP21.62■■□□□ 1.05
TDP1-216ENST00000556867 TUBB8Q3ZCM7 444 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 TOR1AIP1Q5JTV8 583 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 VN1R5Q7Z5H4 357 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 LCA5Q86VQ0 697 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 TEX9Q8N6V9 391 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 OR11G2Q8NGC1 345 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 SMIM10Q96HG1 83 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 MRPL46Q9H2W6 279 aaKnown RBP21.62■■□□□ 1.05
TDP1-216ENST00000556867 RHBGQ9H310 441 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 KLHL31Q9H511 634 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 PPCSQ9HAB8 311 aa21.62■■□□□ 1.05
TDP1-216ENST00000556867 CLK4Q9HAZ1 481 aaKnown RBP21.62■■□□□ 1.05
TDP1-216ENST00000556867 ZNF490Q9ULM2 529 aaPredicted RBP21.62■■□□□ 1.05
TDP1-216ENST00000556867 DOCK10Q96BY6 2186 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 ANKDD1BA6NHY2 528 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 K7EM74 188 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 SHBGP04278 402 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 ACPPP15309 386 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 IL10P22301 178 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 HNF4AP41235 474 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 SOX8P57073 446 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 HIST2H2ACQ16777 129 aaPredicted RBP21.61■■□□□ 1.05
TDP1-216ENST00000556867 HIST2H2AA3Q6FI13 130 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 PTGR2Q8N8N7 351 aaPredicted RBP21.61■■□□□ 1.05
TDP1-216ENST00000556867 FDCSPQ8NFU4 85 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 ACMSDQ8TDX5 336 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 MZB1Q8WU39 189 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 GAL3ST3Q96A11 431 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 MESP1Q9BRJ9 268 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 ATP13A2Q9NQ11 1180 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 GPR83Q9NYM4 423 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 MKL2Q9ULH7 1088 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 G3BP2Q9UN86 482 aaKnown RBP21.61■■□□□ 1.05
TDP1-216ENST00000556867 ANGPTL3Q9Y5C1 460 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 PCDHGB7Q9Y5F8 929 aa21.61■■□□□ 1.05
TDP1-216ENST00000556867 FASNP49327 2511 aaKnown RBP21.6■■□□□ 1.05
TDP1-216ENST00000556867 LRIT2A6NDA9 550 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 LRRC14BA6NHZ5 514 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 C4orf51C9J302 202 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 STX16-NPEPL1H3BU86 382 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 STX16O14662 325 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 SMIM24O75264 130 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 JRKO75564 520 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 SIX3O95343 332 aaPredicted RBP21.6■■□□□ 1.05
TDP1-216ENST00000556867 TBX6O95947 436 aaPredicted RBP21.6■■□□□ 1.05
TDP1-216ENST00000556867 B3GALT4O96024 378 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 PDGFAP04085 211 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 NR1D1P20393 614 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 HNRNPH1P31943 449 aaKnown RBP21.6■■□□□ 1.05
TDP1-216ENST00000556867 HPDP32754 393 aaPredicted RBP21.6■■□□□ 1.05
TDP1-216ENST00000556867 PIK3CGP48736 1102 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 PGDP52209 483 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 EFNA3P52797 238 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 RAB8AP61006 207 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 AIMP2Q13155 320 aaKnown RBP21.6■■□□□ 1.05
TDP1-216ENST00000556867 ADPRMQ3LIE5 342 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 ADNP2Q6IQ32 1131 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 GRHL2Q6ISB3 625 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 WDR93Q6P2C0 686 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 ASB18Q6ZVZ8 466 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 TDRPQ86YL5 185 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 SHISA5Q8N114 240 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 GALNT16Q8N428 558 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 OR5T3Q8NGG3 340 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 CCT6BQ92526 530 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 UBE2E3Q969T4 207 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 OR1F2PQ96R84 312 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 VN1R1Q9GZP7 353 aa21.6■■□□□ 1.05
TDP1-216ENST00000556867 LOC102723996A0A087X1L8 192 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 A6NL46 340 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 MASP2O00187 686 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 E2F3O00716 465 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 HPP00738 406 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 GTF2H2Q13888 395 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 MYBPC3Q14896 1274 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms