RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	NAA20	P61599	178 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	GNGT1	P63211	74 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	EPS8	Q12929	822 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	RPA4	Q13156	261 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SEMA3B	Q13214	749 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	DMP1	Q13316	513 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	IRF3	Q14653	427 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	POU6F1	Q14863	301 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PTGIS	Q16647	500 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	DUSP7	Q16829	419 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZNF829	Q3KNS6	432 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SGO1	Q5FBB7	561 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	XKR4	Q5GH76	650 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CDKL4	Q5MAI5	379 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TCHHL1	Q5QJ38	904 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	KRT79	Q5XKE5	535 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PLA2G4F	Q68DD2	849 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZNF772	Q68DY9	489 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PYHIN1	Q6K0P9	492 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZCCHC12	Q6PEW1	402 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	C5orf46	Q6UWT4	87 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	DCDC5	Q6ZRR9	648 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SETD3	Q86TU7	594 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	RALGPS2	Q86X27	583 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	C16orf71	Q8IYS4	520 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ENTHD1	Q8IYW4	607 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MMP21	Q8N119	569 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SCML4	Q8N228	414 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	UBE2J2	Q8N2K1	259 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	C12orf29	Q8N999	325 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TTC29	Q8NA56	475 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	KCTD6	Q8NC69	237 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839		Q8NFD4	153 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	GRPEL2	Q8TAA5	225 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	VANGL1	Q8TAA9	524 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZNF473	Q8WTR7	871 aa	Known RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SLC20A1	Q8WUM9	679 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	HTR3C	Q8WXA8	447 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PIGK	Q92643	395 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	EXT2	Q93063	718 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	YIPF5	Q969M3	257 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	OTUB2	Q96DC9	234 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	C14orf79	Q96F83	325 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PGM2	Q96G03	612 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CALML4	Q96GE6	196 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PDLIM5	Q96HC4	596 aa	Known RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TMEM80	Q96HE8	168 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SERAC1	Q96JX3	654 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	C9orf72	Q96LT7	481 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CSPG4P5	Q96PW8	444 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SEC22C	Q9BRL7	303 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TEKT3	Q9BXF9	490 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZNF717	Q9BY31	904 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CATSPERB	Q9H7T0	1116 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MINDY3	Q9H8M7	445 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	LRRC40	Q9H9A6	602 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SNX15	Q9NRS6	342 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SLC22A11	Q9NSA0	550 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	POLL	Q9UGP5	575 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SLCO3A1	Q9UIG8	710 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TSPYL4	Q9UJ04	414 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TRMT6	Q9UJA5	497 aa	Known RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	UBE2J1	Q9Y385	318 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MRPS2	Q9Y399	296 aa	Known RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ADGRB1	O14514	1584 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	EFCAB6	Q5THR3	1501 aa		5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZC3H13	Q5T200	1668 aa	Known RBP	5.08	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CLUH	O75153	1309 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839		A0A1W2PN81	502 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839		A0A1W2PRG0	241 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ILVBL	A1L0T0	632 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	BCLAF3	A2AJT9	711 aa	Known RBP	5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	GSAP	A4D1B5	854 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MFSD2B	A6NFX1	497 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	EVPLL	A8MZ36	301 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TEX22	C9J3V5	150 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839		H0YAE9	185 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	DNM1L	O00429	736 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TXNDC9	O14530	226 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TSPAN4	O14817	238 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SLC22A2	O15244	555 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TM9SF1	O15321	606 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ADAM20	O43506	726 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CCDC22	O60826	627 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PMPCB	O75439	489 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CCNK	O75909	580 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	KAT7	O95251	611 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PGLS	O95336	258 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	OR2C1	O95371	312 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SERPINA5	P05154	406 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CYC1	P08574	325 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	OR4E1	P0C645	316 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	UBTFL1	P0CB47	393 aa	Predicted RBP	5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TMEM225B	P0DP42	221 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SRC	P12931	536 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	AHCY	P23526	432 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PRKCH	P24723	683 aa		5.07	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CHRNA7	P36544	502 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms