RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 LOC100653049A0A140TA62 436 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PRSS38A1L453 326 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 D6RAR5 112 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 NRP2O60462 931 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PEX11AO75192 247 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 KRT34O76011 436 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 RNF224P0DH78 156 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PRPS2P11908 318 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ITIH1P19827 911 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ITGAXP20702 1163 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 CXCR2P25025 360 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 NUDT2P50583 147 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 KCNK10P57789 538 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ABRAXAS2Q15018 415 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 CYP2A13Q16696 494 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 AP5B1Q2VPB7 878 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PLA2G4EQ3MJ16 856 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 XKR6Q5GH73 641 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PARGQ86W56 976 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 MYLK4Q86YV6 388 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 FAM13CQ8NE31 585 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 STARD8Q92502 1023 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 CMTM7Q96FZ5 175 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 GFM1Q96RP9 751 aaKnown RBP13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ATG10Q9H0Y0 220 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 LRTM1Q9HBL6 345 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 GID8Q9NWU2 228 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 C1orf109Q9NX04 203 aa13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 G3BP2Q9UN86 482 aaKnown RBP13.67□□□□□ -0.22
TRAPPC6B-206ENST00000556765 FAM234BA2RU67 622 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 E7ENX8 843 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ANGPT2O15123 496 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 SLC22A3O75751 556 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 JAK1P23458 1154 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 CD82P27701 267 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 CCKBRP32239 447 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 THOP1P52888 689 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 CLNS1AP54105 237 aaKnown RBP13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 MLLT10P55197 1068 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 TBPL1P62380 186 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 TAP2Q03519 686 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PRKG2Q13237 762 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 RCAN2Q14206 197 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 GRB7Q14451 532 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 CPSF6Q16630 551 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ATG9BQ674R7 924 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 BLOC1S3Q6QNY0 202 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 FAM83HQ6ZRV2 1179 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ULK2Q8IYT8 1036 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 DEFB107AQ8IZN7 70 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 SFRP1Q8N474 314 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 OR2T11Q8NH01 316 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 DNAJB8Q8NHS0 232 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 HMGCLL1Q8TB92 370 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 JPH3Q8WXH2 748 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 SMPDL3AQ92484 453 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 JADE3Q92613 823 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PYCR2Q96C36 320 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 RCN3Q96D15 328 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ZBTB18Q99592 522 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 HOPXQ9BPY8 73 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 THTPAQ9BU02 230 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PELI2Q9HAT8 420 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 GPR27Q9NS67 375 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 INTS7Q9NVH2 962 aaKnown RBP13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 TRNAU1APQ9NX07 287 aaKnown RBP13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 CCDC167Q9P0B6 97 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 SLC23A2Q9UGH3 650 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 KLF15Q9UIH9 416 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PADI4Q9UM07 663 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 SUFUQ9UMX1 484 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 CCL27Q9Y4X3 112 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 COLEC10Q9Y6Z7 277 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 AKAP9Q99996 3911 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 APCP25054 2843 aa13.66□□□□□ -0.22
TRAPPC6B-206ENST00000556765 LRP4O75096 1905 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PCM1Q15154 2024 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 C15orf38-AP3S2A0A0A6YYH1 394 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 SPTY2D1-AS1A0A0U1RR47 76 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 A0A1W2PP18 115 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 AGRPO00253 132 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 AIM2O14862 343 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PRMT3O60678 531 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ACP5P13686 325 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 JUNDP17535 347 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 GNLYP22749 145 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ETV5P41161 510 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 HTR6P50406 440 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 MTTPP55157 894 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 TBL3Q12788 808 aaKnown RBP13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 KLRB1Q12918 225 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 SNCBQ16143 134 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 DPY19L1Q2PZI1 675 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ZXDCQ2QGD7 858 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PRAMEF13Q5VWM6 474 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 REP15Q6BDI9 236 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 MED27Q6P2C8 311 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PGM2L1Q6PCE3 622 aa13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 BNC2Q6ZN30 1099 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC6B-206ENST00000556765 GK5Q6ZS86 529 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms