RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SLC35G6P0C7Q6 338 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 GABREP78334 506 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 RGS1Q08116 209 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 GRM7Q14831 915 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.57■□□□□ 0.24
TUBB3-211ENST00000556536 TMEM214Q6NUQ4 689 aaKnown RBP16.57■□□□□ 0.24
TUBB3-211ENST00000556536 TLDC1Q6P9B6 456 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 BPHLQ86WA6 291 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-211ENST00000556536 DTWD1Q8N5C7 304 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 ZCCHC10Q8TBK6 192 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 TWIST2Q8WVJ9 160 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 C7orf26Q96N11 449 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 OR51B5Q9H339 312 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 CCDC134Q9H6E4 229 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 POLR1BQ9H9Y6 1135 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 MARCOQ9UEW3 520 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-211ENST00000556536 PCDHGA8Q9Y5G5 932 aa16.57■□□□□ 0.24
TUBB3-211ENST00000556536 SAP18O00422 153 aaKnown RBP16.56■□□□□ 0.24
TUBB3-211ENST00000556536 TXNDC9O14530 226 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 PIP5K1BO14986 540 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 SKAP2O75563 359 aaPredicted RBP16.56■□□□□ 0.24
TUBB3-211ENST00000556536 SCRG1O75711 98 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 B3GALT4O96024 378 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 KITP10721 976 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 ZNF28P17035 718 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 RAB15P59190 212 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 PHEXP78562 749 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 ADPRMQ3LIE5 342 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 MANEAQ5SRI9 462 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 C10orf62Q5T681 223 aaPredicted RBP16.56■□□□□ 0.24
TUBB3-211ENST00000556536 DCAF12Q5T6F0 453 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 CYB5D1Q6P9G0 228 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 CEACAM20Q6UY09 585 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 UBE3DQ7Z6J8 389 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 PROSER1Q86XN7 944 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 CRLF3Q8IUI8 442 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 TMEM126BQ8IUX1 230 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 TTC29Q8NA56 475 aaPredicted RBP16.56■□□□□ 0.24
TUBB3-211ENST00000556536 SLC38A9Q8NBW4 561 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 MS4A6EQ96DS6 147 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 CMTM7Q96FZ5 175 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 DDA1Q9BW61 102 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 NLNQ9BYT8 704 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 ACPTQ9BZG2 426 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 CUTCQ9NTM9 273 aa16.56■□□□□ 0.24
TUBB3-211ENST00000556536 SERTM1A2A2V5 107 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 CHEK2O96017 543 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 NTRK1P04629 796 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 LINC00032P0C843 101 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 ZNF888P0CJ79 500 aaPredicted RBP16.55■□□□□ 0.24
TUBB3-211ENST00000556536 SMIM10L1P0DMW3 83 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 PTX3P26022 381 aaPredicted RBP16.55■□□□□ 0.24
TUBB3-211ENST00000556536 RAB8AP61006 207 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 HMGCS1Q01581 520 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 PDCD2Q16342 344 aaPredicted RBP16.55■□□□□ 0.24
TUBB3-211ENST00000556536 DEPDC1Q5TB30 811 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 KHDRBS2Q5VWX1 349 aaKnown RBP16.55■□□□□ 0.24
TUBB3-211ENST00000556536 PRSS41Q7RTY9 318 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 TRIM46Q7Z4K8 759 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 UTP15Q8TED0 518 aaKnown RBP16.55■□□□□ 0.24
TUBB3-211ENST00000556536 SMIM10Q96HG1 83 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 REXO4Q9GZR2 422 aaKnown RBP16.55■□□□□ 0.24
TUBB3-211ENST00000556536 BRF2Q9HAW0 419 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 PSD3Q9NYI0 1048 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 FOXJ2Q9P0K8 574 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 DHCR7Q9UBM7 475 aaKnown RBP16.55■□□□□ 0.24
TUBB3-211ENST00000556536 PPT2Q9UMR5 302 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 SLC12A4Q9UP95 1085 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 CCL27Q9Y4X3 112 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 PCDHB3Q9Y5E6 796 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 PCDHGA3Q9Y5H0 932 aa16.55■□□□□ 0.24
TUBB3-211ENST00000556536 HEATR5BQ9P2D3 2071 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 A0A0G2JN53 185 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 ERI3O43414 337 aaKnown RBP16.54■□□□□ 0.24
TUBB3-211ENST00000556536 EDF1O60869 148 aaKnown RBP16.54■□□□□ 0.24
TUBB3-211ENST00000556536 KIAA0754O94854 1291 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 PLA2G16P53816 162 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 EMP3P54852 163 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 STXBP1P61764 594 aaKnown RBP16.54■□□□□ 0.24
TUBB3-211ENST00000556536 BTKQ06187 659 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 ZNF33BQ06732 778 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 CSTF3Q12996 717 aaKnown RBP16.54■□□□□ 0.24
TUBB3-211ENST00000556536 CUL3Q13618 768 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 TMEM35AQ53FP2 167 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 GARNL3Q5VVW2 1013 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 RNF165Q6ZSG1 346 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 TTLL10Q6ZVT0 673 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 CHSY3Q70JA7 882 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 MAVSQ7Z434 540 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 WDR75Q8IWA0 830 aaKnown RBP16.54■□□□□ 0.24
TUBB3-211ENST00000556536 DDIASQ8IXT1 998 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 AFAP1L2Q8N4X5 818 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 GBP7Q8N8V2 638 aaPredicted RBP16.54■□□□□ 0.24
TUBB3-211ENST00000556536 OR2T11Q8NH01 316 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 PPP1R36Q96LQ0 422 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 C3orf30Q96M34 536 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 SLC46A1Q96NT5 459 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 SERPINI1Q99574 410 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 ZPBPQ9BS86 351 aa16.54■□□□□ 0.24
TUBB3-211ENST00000556536 NDC1Q9BTX1 674 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms