RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ANKMY1Q9P2S6 941 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 A0A0G2JN53 185 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 FAM92AA1XBS5 289 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 AGAP5A6NIR3 686 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 CREMQ03060 361 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 KCNC4Q03721 635 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 GDPD4Q6W3E5 623 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 FAM220AQ7Z4H9 259 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 PGBD3Q8N328 593 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 OR10H4Q8NGA5 316 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 OR2T11Q8NH01 316 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 OR8D1Q8WZ84 308 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 MAL2Q969L2 176 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 APIPQ96GX9 242 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 REEP4Q9H6H4 257 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 AKAP7Q9P0M2 348 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 SBK3P0C264 359 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 ITGAMP11215 1152 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 KHKP50053 298 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 LGALS3BPQ08380 585 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 MAB21L1Q13394 359 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 REEP3Q6NUK4 255 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 GPR149Q86SP6 731 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 P2RX2Q9UBL9 471 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 MGAT4BQ9UQ53 548 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 C1QTNF3-AMACRE9PGA6 284 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 M0QZQ0 153 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 AKAP8O43823 692 aaKnown RBP14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 SEMA3DO95025 777 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 IFNGP01579 166 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 C1QAP02745 245 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 JUPP14923 745 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 PFKLP17858 780 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 DGKGP49619 791 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 CCR4P51679 360 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 LARS2Q15031 903 aaKnown RBP14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 TBX5Q99593 518 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 YIPF4Q9BSR8 244 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 CCDC32Q9BV29 185 aa14.5□□□□□ -0.09
ARHGEF40-207ENST00000556399 MRPS14O60783 128 aaKnown RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 HRH2P25021 359 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 ADARB1P78563 741 aaKnown RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 GRSF1Q12849 480 aaKnown RBP eCLIP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 TBPL2Q6SJ96 375 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 RNF44Q7L0R7 432 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 GALNT13Q8IUC8 556 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF433Q8N7K0 673 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 SLC37A3Q8NCC5 494 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 RHBDF1Q96CC6 855 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF486Q96H40 463 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 WACQ9BTA9 647 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 FBXW2Q9UKT8 454 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 GPSM3Q9Y4H4 160 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 SPEF1Q9Y4P9 236 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 ADH1AP07327 375 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 NUP62P37198 522 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 PREPP48147 710 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 SLC11A1P49279 550 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 PSMD4P55036 377 aaKnown RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZXDBP98169 803 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 SMN1Q16637 294 aaKnown RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 IRAK1BP1Q5VVH5 260 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 RGMBQ6NW40 437 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 NCEH1Q6PIU2 408 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 TEX37Q96LM6 180 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF583Q96ND8 569 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 SMIM14Q96QK8 99 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 UHRF1Q96T88 793 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 CCM2Q9BSQ5 444 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 SPATA9Q9BWV2 254 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 TUBB1Q9H4B7 451 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 ACOT13Q9NPJ3 140 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 THG1LQ9NWX6 298 aaKnown RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 DLGAP4Q9Y2H0 992 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 TCEA1P23193 301 aaKnown RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 CRISP1P54107 249 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 PRR5P85299 388 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 SPHARQ15513 63 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 KCNJ8Q15842 424 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 TMEM44Q2T9K0 475 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF311Q5JNZ3 666 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 PLEKHS1Q5SXH7 462 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 TMEM207Q6UWW9 146 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 Q6ZVU0 165 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF438Q7Z4V0 828 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 TTC9BQ8N6N2 239 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 TMEM39AQ9NV64 488 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 UCKL1Q9NWZ5 548 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 E2F3O00716 465 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 AQP9O43315 295 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 RAB36O95755 333 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 LAMP1P11279 417 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 TNFRSF1BP20333 461 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 GSTM3P21266 225 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 GNG2P59768 71 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 OTUD1Q5VV17 481 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 RPL3LQ92901 407 aaKnown RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 DUS3LQ96G46 650 aaKnown RBP14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 IL1RAPQ9NPH3 570 aa14.49□□□□□ -0.09
ARHGEF40-207ENST00000556399 BMP4P12644 408 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms