RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 TTI1O43156 1089 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 NEURL1O76050 574 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 FHP07954 510 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 HIST1H2AGP0C0S8 130 aaPredicted RBP12.47□□□□□ -0.41
TGFB3-204ENST00000556285 ALOX12P18054 663 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 HIST1H2ADP20671 130 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 GRK3P35626 688 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 HNF4AP41235 474 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 IL2P60568 153 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 HYAL2Q12891 473 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 HERC3Q15034 1050 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 RNFT1Q5M7Z0 435 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 GALNTL5Q7Z4T8 443 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 ZNF227Q86WZ6 799 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 ANKRD53Q8N9V6 530 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 ADAMTS18Q8TE60 1221 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 UTP15Q8TED0 518 aaKnown RBP12.47□□□□□ -0.41
TGFB3-204ENST00000556285 GRK7Q8WTQ7 553 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 TBC1D20Q96BZ9 403 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 FBXL8Q96CD0 374 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 CFAP36Q96G28 342 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 HIST1H2AHQ96KK5 128 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 FRMD6Q96NE9 622 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 OR1F2PQ96R84 312 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 NAP1L3Q99457 506 aaPredicted RBP12.47□□□□□ -0.41
TGFB3-204ENST00000556285 LPAR4Q99677 370 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 HIST1H2AJQ99878 128 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 HAUS8Q9BT25 410 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 H2AFJQ9BTM1 129 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 SARGQ9BW04 601 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 AICDAQ9GZX7 198 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 KLHL31Q9H511 634 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 SUCOQ9UBS9 1254 aaKnown RBP12.47□□□□□ -0.41
TGFB3-204ENST00000556285 NPIPA1Q9UND3 350 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 CHMP2BQ9UQN3 213 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 MED13LQ71F56 2210 aa12.47□□□□□ -0.41
TGFB3-204ENST00000556285 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
TGFB3-204ENST00000556285 HCFC1P51610 2035 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 A8MUA0 341 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 CDC7O00311 574 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 TTC4O95801 387 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 SP1P08047 785 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 MYBL2P10244 700 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 MAOAP21397 527 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 HTR1EP28566 365 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 ELK3P41970 407 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 SCTRP47872 440 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 KRTAP10-9P60411 292 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 RAB8AP61006 207 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 HSF1Q00613 529 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 ALDH6A1Q02252 535 aaKnown RBP12.46□□□□□ -0.41
TGFB3-204ENST00000556285 OC90Q02509 493 aaPredicted RBP12.46□□□□□ -0.41
TGFB3-204ENST00000556285 PWP1Q13610 501 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 C18orf21Q32NC0 220 aaPredicted RBP12.46□□□□□ -0.41
TGFB3-204ENST00000556285 SBSNQ6UWP8 590 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 BNC2Q6ZN30 1099 aaPredicted RBP12.46□□□□□ -0.41
TGFB3-204ENST00000556285 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.46□□□□□ -0.41
TGFB3-204ENST00000556285 SIAH3Q8IW03 269 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 ZNF295-AS1Q8N0V1 137 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 CYP4X1Q8N118 509 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 ZNF808Q8N4W9 903 aaPredicted RBP12.46□□□□□ -0.41
TGFB3-204ENST00000556285 NT5CQ8TCD5 201 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 ELP5Q8TE02 316 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 GPR137Q96N19 417 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 PTCHD1Q96NR3 888 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 PHF12Q96QT6 1004 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 FAM129AQ9BZQ8 928 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 TRIM8Q9BZR9 551 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 PPANQ9NQ55 473 aaKnown RBP12.46□□□□□ -0.41
TGFB3-204ENST00000556285 SNX12Q9UMY4 172 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 ZNF835Q9Y2P0 537 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 VWA7Q9Y334 891 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 PCDHGB6Q9Y5F9 930 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 KLF2Q9Y5W3 355 aaPredicted RBP12.46□□□□□ -0.41
TGFB3-204ENST00000556285 PSAT1Q9Y617 370 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 EML6Q6ZMW3 1958 aa12.46□□□□□ -0.41
TGFB3-204ENST00000556285 ASPDHA6ND91 283 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 NPEPPSL1A6NEC2 478 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 NDC80O14777 642 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 CD46P15529 392 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 IL10P22301 178 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 TPP2P29144 1249 aaPredicted RBP12.45□□□□□ -0.42
TGFB3-204ENST00000556285 EEF1DP29692 281 aaKnown RBP12.45□□□□□ -0.42
TGFB3-204ENST00000556285 AP1S2P56377 157 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 REEP5Q00765 189 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 RBPJQ06330 500 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 CSHL1Q14406 222 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 ZNF460Q14592 562 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 PPP1R3AQ16821 1122 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 ZNF630Q2M218 657 aaPredicted RBP12.45□□□□□ -0.42
TGFB3-204ENST00000556285 KIAA0408Q6ZU52 694 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 GALNT7Q86SF2 657 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 THOC6Q86W42 341 aaKnown RBP12.45□□□□□ -0.42
TGFB3-204ENST00000556285 RPS19BP1Q86WX3 136 aaKnown RBP12.45□□□□□ -0.42
TGFB3-204ENST00000556285 CHERPQ8IWX8 916 aaKnown RBP12.45□□□□□ -0.42
TGFB3-204ENST00000556285 SLC5A8Q8N695 610 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 NFAM1Q8NET5 270 aaPredicted RBP12.45□□□□□ -0.42
TGFB3-204ENST00000556285 SLC5A11Q8WWX8 675 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 SLC6A16Q9GZN6 736 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 RHBGQ9H310 441 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms