RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 HAUS4Q9H6D7 363 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 KCNK13Q9HB14 408 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 TRPC4Q9UBN4 977 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 CDC14AQ9UNH5 594 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 REXO2Q9Y3B8 237 aaKnown RBP6.44□□□□□ -1.38
ATXN3-236ENST00000556220 HEY1Q9Y5J3 304 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 ALG6Q9Y672 507 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 ARL5AQ9Y689 179 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 SNRNP200O75643 2136 aaKnown RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 LOC105369274A0A096LPK9 316 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 IGHV3-20A0A0C4DH32 117 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 LOC102723532A0A0G2JNH3 316 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 GABRR3A8MPY1 467 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 SYT5O00445 386 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 FFAR3O14843 346 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 LIN7AO14910 233 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 PPP1R12AO14974 1030 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 GPR42O15529 346 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 PRPF4O43172 522 aaKnown RBP eCLIP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 NME2P1O60361 137 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 SLC25A12O75746 678 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 GYPCP04921 128 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 C8orf89P0DMQ9 161 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 ZNF16P17020 682 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 TFEBP19484 476 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 ITGALP20701 1170 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 CD9P21926 228 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 KDELR1P24390 212 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 PTPN3P26045 913 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 PEX19P40855 299 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 ZFP36L2P47974 494 aaKnown RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 EFNA3P52797 238 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 NKX6-1P78426 367 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 PLOD1Q02809 727 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 UBXN1Q04323 297 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 SNTB1Q13884 538 aaKnown RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 DAZAP2Q15038 168 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 TAF1AQ15573 450 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 SF1Q15637 639 aaKnown RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 PRTGQ2VWP7 1150 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 BTBD16Q32M84 506 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 GXYLT1Q4G148 440 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 EMC4Q5J8M3 183 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 FRMPD2BQ6IN97 320 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 ARHGAP11AQ6P4F7 1023 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 CPEB2Q7Z5Q1 589 aaKnown RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 LIX1LQ8IVB5 337 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 PHC2Q8IXK0 858 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 OR4N4Q8N0Y3 316 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 CIARTQ8N365 385 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 C2orf73Q8N5S3 287 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 POGLUT1Q8NBL1 392 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 SIMC1Q8NDZ2 872 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 OR10Q1Q8NGQ4 319 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 M1APQ8TC57 530 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 METTL21AQ8WXB1 218 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 RAPGEF5Q92565 580 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 MVB12AQ96EY5 273 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 C10orf90Q96M02 699 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 OLFM3Q96PB7 478 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 ERGIC2Q96RQ1 377 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 CYTH2Q99418 400 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 MENTQ9BUN1 341 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 SARGQ9BW04 601 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 MKKSQ9NPJ1 570 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 BEX4Q9NWD9 120 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-236ENST00000556220 ANAPC7Q9UJX3 599 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 MYO6Q9UM54 1294 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 KLK4Q9Y5K2 254 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 FAM169AQ9Y6X4 670 aa6.43□□□□□ -1.38
ATXN3-236ENST00000556220 ZNF407Q9C0G0 2248 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 SCN2AQ99250 2005 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 A0A0J9YVX5 310 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 SLC5A10A0PJK1 596 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 C5orf60A6NFR6 353 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 LGALS16A8MUM7 142 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 TFECO14948 347 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 ARHGEF9O43307 516 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 CDC40O60508 579 aaKnown RBP eCLIP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 SEC24DO94855 1032 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 AP2A2O94973 939 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 FKBP9O95302 570 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 EIF2S1P05198 315 aaKnown RBP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 ANXA5P08758 320 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 GJC1P36383 396 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 CDKN1CP49918 316 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 DCAF7P61962 342 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 MVKQ03426 396 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 MPP3Q13368 585 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 BRD3Q15059 726 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 PCBP2Q15366 365 aaKnown RBP eCLIP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 EXT1Q16394 746 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 SLC25A35Q3KQZ1 300 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 GPR33Q49SQ1 333 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 CMPK2Q5EBM0 449 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 SLC9A4Q6AI14 798 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 FBXO42Q6P3S6 717 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 NPNTQ6UXI9 565 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 UNC5DQ6UXZ4 953 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 CYP2R1Q6VVX0 501 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms