RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 WDR41Q9HAD4 459 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 RNPEPL1Q9HAU8 725 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 FSCN3Q9NQT6 498 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 SDR39U1Q9NRG7 319 aaPredicted RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 PHPT1Q9NRX4 125 aaPredicted RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 FBXL12Q9NXK8 326 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 CCDC167Q9P0B6 97 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 ATXN10Q9UBB4 475 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 ZNF225Q9UK10 706 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 SNX6Q9UNH7 406 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 EIF3LQ9Y262 564 aaKnown RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 NDUFAF1Q9Y375 327 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 ASB1Q9Y576 335 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 NUMA1Q14980 2115 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 DYTNA2CJ06 578 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 FAM149AA5PLN7 773 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ARHGEF33A8MVX0 844 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 GPR89AB7ZAQ6 455 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 K7ESM1 405 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 IFRD1O00458 451 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-204ENST00000555890 MANBAO00462 879 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 MRASO14807 208 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ANGPT2O15123 496 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 SH3BP5O60239 455 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 KCNJ13O60928 360 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 FKBP6O75344 327 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ENTPD5O75356 428 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 SLC22A3O75751 556 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 KCNH1O95259 989 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PSMG1O95456 288 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 KLF8O95600 359 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-204ENST00000555890 STAMBPO95630 424 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 EGFP01133 1207 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 RPN2P04844 631 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PCCBP05166 539 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ALDOCP09972 364 aaKnown RBP6.57□□□□□ -1.36
SLIRP-204ENST00000555890 GPR89BP0CG08 455 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 SFTPCP11686 197 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ZNF8P17098 575 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-204ENST00000555890 GNPDA1P46926 289 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PREPP48147 710 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 MTTPP55157 894 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 KCNK10P57789 538 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 TAS2R38P59533 333 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ACTR3P61158 418 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PSME3P61289 254 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ZNF33BQ06732 778 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 RPA4Q13156 261 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 KPNB1Q14974 876 aaKnown RBP6.57□□□□□ -1.36
SLIRP-204ENST00000555890 WSCD2Q2TBF2 565 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 AP5B1Q2VPB7 878 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PTCHD3Q3KNS1 767 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 GGTA1PQ4G0N0 100 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 FBXO43Q4G163 708 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PDCD4Q53EL6 469 aaKnown RBP6.57□□□□□ -1.36
SLIRP-204ENST00000555890 EOGTQ5NDL2 527 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 AGBL4Q5VU57 503 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PRMT9Q6P2P2 845 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 AAGABQ6PD74 315 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 SLC23A3Q6PIS1 610 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PAOXQ6QHF9 649 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 AGTRAPQ6RW13 159 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 SCIMPQ6UWF3 145 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 UNC5DQ6UXZ4 953 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 HACD2Q6Y1H2 254 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 MBOAT1Q6ZNC8 495 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 C8orf86Q6ZUL3 223 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 GLRX5Q86SX6 157 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 TRIM74Q86UV6 250 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 AMZ2Q86W34 360 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 HEATR4Q86WZ0 1026 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 DMRTC2Q8IXT2 367 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-204ENST00000555890 KLHDC8AQ8IYD2 350 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 FAM9CQ8IZT9 166 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 DTWD1Q8N5C7 304 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ENDOVQ8N8Q3 282 aaKnown RBP6.57□□□□□ -1.36
SLIRP-204ENST00000555890 MFSD2AQ8NA29 543 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 FNDC5Q8NAU1 212 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 OR2L2Q8NH16 312 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 UBASH3BQ8TF42 649 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ASB12Q8WXK4 309 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PIGKQ92643 395 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ROPN1LQ96C74 230 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ERLEC1Q96DZ1 483 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 COX14Q96I36 57 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 CDRT15Q96T59 188 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ZBTB18Q99592 522 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 NPAS2Q99743 824 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 HOPXQ9BPY8 73 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ORAI3Q9BRQ5 295 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 TEX101Q9BY14 249 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 DPEP2Q9H4A9 486 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ELOVL6Q9H5J4 265 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 RMI1Q9H9A7 625 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PREBQ9HCU5 417 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 AIG1Q9NVV5 245 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 GID8Q9NWU2 228 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 NOP53Q9NZM5 478 aaKnown RBP6.57□□□□□ -1.36
SLIRP-204ENST00000555890 KLQ9UEF7 1012 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 GIMAP2Q9UG22 337 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms