RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MAP1BP46821 2468 aaKnown RBP9.44□□□□□ -0.9
PSEN1-213ENST00000555386 SCN2AQ99250 2005 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 SYCE1LA8MT33 242 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 TMEM233B4DJY2 109 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 TMEM150CB9EJG8 249 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 H7BY64 318 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 PSMD12O00232 456 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-213ENST00000555386 POLR1CO15160 346 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-213ENST00000555386 HCRTR1O43613 425 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 PRICKLE3O43900 615 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-213ENST00000555386 KERAO60938 352 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 VPS4BO75351 444 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 BCAS2O75934 225 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-213ENST00000555386 WDR47O94967 919 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 STATHP02808 62 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 ANKRD34CP0C6C1 535 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 ERGP11308 486 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 GFAPP14136 432 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 CD46P15529 392 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 SLC5A2P31639 672 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 CLCN2P51788 898 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 SHC2P98077 582 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 EIF3IQ13347 325 aaKnown RBP9.44□□□□□ -0.9
PSEN1-213ENST00000555386 FLOT2Q14254 428 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 ZXDCQ2QGD7 858 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-213ENST00000555386 PTCHD3Q3KNS1 767 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 UNC50Q53HI1 259 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 TCHHL1Q5QJ38 904 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-213ENST00000555386 PRAMEF17Q5VTA0 474 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 TMEM198Q66K66 360 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 CAPN13Q6MZZ7 669 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-213ENST00000555386 PDSS2Q86YH6 399 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 SNX31Q8N9S9 440 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 CATSPER1Q8NEC5 780 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 OR2A1Q8NGT9 310 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 PYDC1Q8WXC3 89 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 ATL1Q8WXF7 558 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 GATA6Q92908 595 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 PHF21BQ96EK2 531 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 SLC41A2Q96JW4 573 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 PPP1R36Q96LQ0 422 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 SLC46A1Q96NT5 459 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 PRAP1Q96NZ9 151 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 BTBD9Q96Q07 612 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 ATOH8Q96SQ7 321 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 C1QTNF3Q9BXJ4 246 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 NRSN2Q9GZP1 204 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 CCDC86Q9H6F5 360 aaKnown RBP9.44□□□□□ -0.9
PSEN1-213ENST00000555386 SLC6A20Q9NP91 592 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 ACSS2Q9NR19 701 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 FGF21Q9NSA1 209 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 STARD5Q9NSY2 213 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 INTS7Q9NVH2 962 aaKnown RBP9.44□□□□□ -0.9
PSEN1-213ENST00000555386 FOXJ2Q9P0K8 574 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 SLC22A14Q9Y267 594 aa9.44□□□□□ -0.9
PSEN1-213ENST00000555386 A0A0J9YVX5 310 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 BBIP1A8MTZ0 92 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 C9orf172C9J069 976 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 H3BNX3 289 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 STX16-NPEPL1H3BU86 382 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 STX16O14662 325 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 TOX3O15405 576 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 SKAP2O75563 359 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 SUPT7LO94864 414 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 CCNDBP1O95273 360 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 EIF2S1P05198 315 aaKnown RBP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 CTSBP07858 339 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 CDH1P12830 882 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 MRPL19P49406 292 aaKnown RBP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 AGTR2P50052 363 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 MC2RQ01718 297 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 MEF2AQ02078 507 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 TRAP1Q12931 704 aaKnown RBP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 RTP5Q14D33 572 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 PFKFB4Q16877 469 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 UGT3A2Q3SY77 523 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 DCAF12Q5T6F0 453 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 OGFRL1Q5TC84 451 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 TMEM164Q5U3C3 297 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 FCRL6Q6DN72 434 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 UNQ6494/PRO21346Q6UXR6 183 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 LARP4Q71RC2 724 aaKnown RBP eCLIP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 THOC6Q86W42 341 aaKnown RBP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 C17orf64Q86WR6 236 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 ZFAND4Q86XD8 727 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 LRRC56Q8IYG6 542 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 PQLC1Q8N2U9 271 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 D2HGDHQ8N465 521 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 BMPERQ8N8U9 685 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 HMGCLL1Q8TB92 370 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 RHBDF1Q96CC6 855 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 C19orf60Q96EN9 201 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 TCTN2Q96GX1 697 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 TAAR9Q96RI9 348 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 SLC7A5P2Q9GIP4 190 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 FANCEQ9HB96 536 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 SIDT1Q9NXL6 827 aaKnown RBP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 SUCOQ9UBS9 1254 aaKnown RBP9.43□□□□□ -0.9
PSEN1-213ENST00000555386 RARRES3Q9UL19 164 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 DYRK1BQ9Y463 629 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms