RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 MGAT4AQ9UM21 535 aa15.11■□□□□ 0.01
SYNE3-203ENST00000554873 PTPRDP23468 1912 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 M0QZQ0 153 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 CTSHP09668 335 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 PYDC2Q56P42 97 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 RETSATQ6NUM9 610 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 FAM124AQ86V42 546 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 RBFAQ8N0V3 343 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 SLC37A3Q8NCC5 494 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 C9orf43Q8TAL5 461 aaPredicted RBP15.1■□□□□ 0.01
SYNE3-203ENST00000554873 NETO1Q8TDF5 533 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 ESAMQ96AP7 390 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 KIAA1143Q96AT1 154 aaPredicted RBP15.1■□□□□ 0.01
SYNE3-203ENST00000554873 FAM129BQ96TA1 746 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 MGLLQ99685 303 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 DERL2Q9GZP9 239 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 PIGUQ9H490 435 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 IKZF5Q9H5V7 419 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 PCDHB16Q9NRJ7 776 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 ENOPH1Q9UHY7 261 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 MRPS7Q9Y2R9 242 aaKnown RBP15.1■□□□□ 0.01
SYNE3-203ENST00000554873 TRAV19A0A0A6YYK7 116 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 ADAM11O75078 769 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 CELF2O95319 508 aaKnown RBP15.1■□□□□ 0.01
SYNE3-203ENST00000554873 TSPAN19P0C672 248 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 HOXC8P31273 242 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 BMP8BP34820 402 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 TBX4P57082 545 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 CAMK2GQ13555 558 aaPredicted RBP15.1■□□□□ 0.01
SYNE3-203ENST00000554873 EXOSC2Q13868 293 aaKnown RBP15.1■□□□□ 0.01
SYNE3-203ENST00000554873 BMP8AQ7Z5Y6 402 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 GLCCI1Q86VQ1 547 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 THEM5Q8N1Q8 247 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 C7orf57Q8NEG2 295 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 FUBP1Q96AE4 644 aaKnown RBP15.1■□□□□ 0.01
SYNE3-203ENST00000554873 CDKN2AIPNLQ96HQ2 116 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 WACQ9BTA9 647 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 RANBP3Q9H6Z4 567 aaPredicted RBP15.1■□□□□ 0.01
SYNE3-203ENST00000554873 GALNT9Q9HCQ5 603 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 RDH8Q9NYR8 311 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 ABCG2Q9UNQ0 655 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 CLCA3PQ9Y6N3 262 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 CENPFP49454 3210 aa15.1■□□□□ 0.01
SYNE3-203ENST00000554873 LCHNA4D1U4 455 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 SCAMP3O14828 347 aaKnown RBP15.09■□□□□ 0.01
SYNE3-203ENST00000554873 ALDH1A1P00352 501 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 VIPP01282 170 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 UROSP10746 265 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 OGNP20774 298 aaKnown RBP15.09■□□□□ 0.01
SYNE3-203ENST00000554873 C6orf132Q5T0Z8 1188 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 CIR1Q86X95 450 aaPredicted RBP15.09■□□□□ 0.01
SYNE3-203ENST00000554873 PM20D2Q8IYS1 436 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 WDR48Q8TAF3 677 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 FOPNLQ96NB1 174 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 MARVELD1Q9BSK0 173 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 ABCB9Q9NP78 766 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 EXOSC4Q9NPD3 245 aaKnown RBP15.09■□□□□ 0.01
SYNE3-203ENST00000554873 HEBP1Q9NRV9 189 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 SNTG1Q9NSN8 517 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 COPS3Q9UNS2 423 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 LINC01387J3KSC0 135 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 M0QZ92 97 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 PCDH17O14917 1159 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 ACVRL1P37023 503 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 HAAOP46952 286 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 AP1S2P56377 157 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 ST3GAL4Q11206 333 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 FBXL22Q6P050 247 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 DCBLD1Q8N8Z6 715 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 KCT2Q8NC54 265 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 OR10Q1Q8NGQ4 319 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 NUDT8Q8WV74 236 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 UPRTQ96BW1 309 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 GFM1Q96RP9 751 aaKnown RBP15.09■□□□□ 0.01
SYNE3-203ENST00000554873 CLEC4MQ9H2X3 399 aaPredicted RBP15.09■□□□□ 0.01
SYNE3-203ENST00000554873 TAS2R13Q9NYV9 303 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 PCTPQ9UKL6 214 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 SLC45A1Q9Y2W3 748 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 NLRC5Q86WI3 1866 aa15.09■□□□□ 0.01
SYNE3-203ENST00000554873 FAM240BA0A1B0GVZ2 78 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 NPEPPSL1A6NEC2 478 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 HCN1O60741 890 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 OR4F21O95013 312 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 FGF1P05230 155 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 HLA-DPA1P20036 260 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 PBX3P40426 434 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 INO80DQ53TQ3 878 aaPredicted RBP15.08■□□□□ 0.01
SYNE3-203ENST00000554873 OR4F3Q6IEY1 312 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 FAHD1Q6P587 224 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 MRPL10Q7Z7H8 261 aaKnown RBP15.08■□□□□ 0.01
SYNE3-203ENST00000554873 C19orf18Q8NEA5 215 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 PCNPQ8WW12 178 aaKnown RBP15.08■□□□□ 0.01
SYNE3-203ENST00000554873 ASIC4Q96FT7 647 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 DIRAS2Q96HU8 199 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 ACTL8Q9H568 366 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 LDAHQ9H6V9 325 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 ASB1Q9Y576 335 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 TRPV2Q9Y5S1 764 aa15.08■□□□□ 0.01
SYNE3-203ENST00000554873 FAM220BPB1ANY3 271 aa15.08■□□□□ 0
SYNE3-203ENST00000554873 PRSS44E7EML9 344 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms