RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 PKNOX1P55347 436 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 STXBP1P61764 594 aaKnown RBP20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 SRSF6Q13247 344 aaKnown RBP20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 DNASE1L3Q13609 305 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 DSG2Q14126 1118 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 HERC3Q15034 1050 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 C10orf62Q5T681 223 aaPredicted RBP20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 COX15Q7KZN9 410 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 PRSS41Q7RTY9 318 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 HUS1BQ8NHY5 278 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 WDR20Q8TBZ3 569 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 UTP15Q8TED0 518 aaKnown RBP20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 CCT6BQ92526 530 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 FKBP10Q96AY3 582 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 SMIM10Q96HG1 83 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 ATP6V1G3Q96LB4 118 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 GPR87Q9BY21 358 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 KLHL31Q9H511 634 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 ZNF304Q9HCX3 659 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 IFT80Q9P2H3 777 aaPredicted RBP20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 MAU2Q9Y6X3 613 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 ZZEF1O43149 2961 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 USP24Q9UPU5 2620 aa20.35■□□□□ 0.85
SDR39U1-208ENST00000554698 TMEM120BA0PK00 339 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 URADA6NGE7 173 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 SRRM3A6NNA2 597 aaPredicted RBP20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 C9J4A7 227 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 H0YIG0 161 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 OR4F21O95013 312 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 ESRRBO95718 433 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 ZNF888P0CJ79 500 aaPredicted RBP20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 PIM1P11309 404 aaPredicted RBP20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 ALOX12P18054 663 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 IL1RNP18510 177 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 HPDP32754 393 aaPredicted RBP20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 NCF4Q15080 339 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 TOR1AIP1Q5JTV8 583 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 FRG2Q64ET8 278 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 MRPL14Q6P1L8 145 aaKnown RBP20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 ABHD13Q7L211 337 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 OVCH1Q7RTY7 1134 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 PDSS2Q86YH6 399 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 AMER3Q8N944 861 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 OR9A4Q8NGU2 314 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 OR6Y1Q8NGX8 325 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 AGAP11Q8TF27 550 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 GAL3ST3Q96A11 431 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 MS4A6EQ96DS6 147 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 FRG2BQ96QU4 278 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 TRMOQ9BU70 441 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 EFHD1Q9BUP0 239 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 MS4A8Q9BY19 250 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 SLC26A1Q9H2B4 701 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 ANKHQ9HCJ1 492 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 DMRT3Q9NQL9 472 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 IL17BQ9UHF5 180 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 KCND3Q9UK17 655 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 C4orf51C9J302 202 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 H3BQF6 201 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 FOXE1O00358 373 aaPredicted RBP20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 BIRC5O15392 142 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 EFSO43281 561 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 GALR3O60755 368 aaPredicted RBP20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 KLHL18O94889 574 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 ITPKBP27987 946 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 CCR10P46092 362 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 AVPR1BP47901 424 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 SLC9A5Q14940 896 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 TTMPQ5BVD1 217 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 ARHGAP40Q5TG30 622 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 MMABQ96EY8 250 aaPredicted RBP20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 CNDP1Q96KN2 507 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 MTERF1Q99551 399 aaKnown RBP20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 SLC29A3Q9BZD2 475 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 REXO4Q9GZR2 422 aaKnown RBP20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 WDR70Q9NW82 654 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 PSD3Q9NYI0 1048 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 PPT2Q9UMR5 302 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 NAALAD2Q9Y3Q0 740 aa20.34■□□□□ 0.85
SDR39U1-208ENST00000554698 EPG5Q9HCE0 2579 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 FFAR3O14843 346 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 GPR42O15529 346 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 NPHS1O60500 1241 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 ALBP02768 609 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 ENO1P06733 434 aaKnown RBP20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 WT1P19544 449 aaPredicted RBP20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 FBLP22087 321 aaKnown RBP20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 PTPN4P29074 926 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 NEK2P51955 445 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 RAB8AP61006 207 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 RPS15P62841 145 aaKnown RBP20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 DDX39BQ13838 428 aaKnown RBP20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 DEFB134Q4QY38 66 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 TMEM35AQ53FP2 167 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 BROXQ5VW32 411 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 NIPAL1Q6NVV3 410 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 GOLGA6L1Q8N7Z2 621 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 ENDOVQ8N8Q3 282 aaKnown RBP20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 CDYL2Q8N8U2 506 aa20.33■□□□□ 0.84
SDR39U1-208ENST00000554698 OR2L5Q8NG80 312 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms