RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ISCA1Q9BUE6 129 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 MECRQ9BV79 373 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GAL3ST2Q9H3Q3 398 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PADI2Q9Y2J8 665 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SAMHD1Q9Y3Z3 626 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PFASO15067 1338 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 IGHV3OR16-10A0A075B7F0 116 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 A0A1B0GTH6 734 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 AGPAT2O15120 278 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ACTL6BO94805 426 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 OR10J4P0C629 311 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 RSU1Q15404 277 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ESCO2Q56NI9 601 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TSTD2Q5T7W7 516 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TMPPEQ6ZT21 453 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TP53INP2Q8IXH6 220 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 NDC1Q9BTX1 674 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ANKHQ9HCJ1 492 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ATXN10Q9UBB4 475 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 POFUT2Q9Y2G5 429 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 WDR45Q9Y484 360 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 LAMC1P11047 1609 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 DGAT1O75907 488 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 FARS2O95363 451 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 RENP00797 406 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NCBP2P52298 156 aaKnown RBP eCLIP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SRSF5Q13243 272 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PLEKHN1Q494U1 663 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM268Q5VZI3 342 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SHFQ7M4L6 423 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MRPL10Q7Z7H8 261 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SLC9B2Q86UD5 537 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NKX2-3Q8TAU0 364 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SUN5Q8TC36 379 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GCDHQ92947 438 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PPP1R16AQ96I34 528 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 KCNA7Q96RP8 456 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MTERF1Q99551 399 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SNRNP25Q9BV90 132 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PPCSQ9HAB8 311 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PCYOX1Q9UHG3 505 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 POLHQ9Y253 713 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SALL1Q9NSC2 1324 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 IGKV3D-11A0A0A0MRZ8 115 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NOBOXO60393 691 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GATBO75879 557 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 B3GALT4O96024 378 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MAS1P04201 325 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 IGKV3-11P04433 115 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 EDNRBP24530 442 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 IRS1P35568 1242 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PRSS12P56730 875 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TRA2BP62995 288 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TAGLNQ01995 201 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SCARB2Q14108 478 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 OR2B11Q5JQS5 317 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ATG9BQ674R7 924 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 STEAP2Q8NFT2 490 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MFSD8Q8NHS3 518 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 C12orf43Q96C57 262 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PIWIL1Q96J94 861 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TDRD1Q9BXT4 1180 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PRDM6Q9NQX0 595 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GTF2IRD1Q9UHL9 959 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SPIN1Q9Y657 262 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TPP1O14773 563 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CIDEAO60543 219 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ADH1CP00326 375 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 RFX5P48382 616 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 LHX1P48742 406 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 RIDAP52758 137 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MSLNQ13421 630 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NTRK2Q16620 822 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 DCST1Q5T197 706 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 BAIAP2L2Q6UXY1 529 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SLC30A8Q8IWU4 369 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 H7C0S8 307 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ALOX15BO15296 676 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SOX14O95416 240 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CTDNEP1O95476 244 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 IRF2P14316 349 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TCF4P15884 667 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NUDT6P53370 316 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 EEF1A1P68104 462 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 POU4F2Q12837 409 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 C1orf186Q6ZWK4 172 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ADGRF3Q8IZF5 1079 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SH3RF2Q8TEC5 729 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 UFSP2Q9NUQ7 469 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 RHOP08100 348 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 RARAP10276 462 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MIPP30301 263 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 STILQ15468 1287 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MPPED2Q15777 294 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 EGFLAMQ63HQ2 1017 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 FSTL4Q6MZW2 842 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GLB1L2Q8IW92 636 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 LINC00469Q8N7U9 141 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM41AQ96HV5 264 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NMUR2Q9GZQ4 415 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms