RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 SVILO95425 2214 aa17.64■□□□□ 0.41
CPSF2-203ENST00000554290 MYO9AB2RTY4 2548 aa17.64■□□□□ 0.41
CPSF2-203ENST00000554290 CACNA1DQ01668 2161 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 NDC80O14777 642 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 B4GALT2O60909 372 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 CA7P43166 264 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 SCTRP47872 440 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 PGGT1BP53609 377 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 ARL4CP56559 192 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 DR1Q01658 176 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 OC90Q02509 493 aaPredicted RBP17.63■□□□□ 0.41
CPSF2-203ENST00000554290 SRSF11Q05519 484 aaKnown RBP17.63■□□□□ 0.41
CPSF2-203ENST00000554290 FRG1Q14331 258 aaKnown RBP17.63■□□□□ 0.41
CPSF2-203ENST00000554290 KRTCAP3Q53RY4 240 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 STEAP4Q687X5 459 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 TRMT10BQ6PF06 316 aaKnown RBP17.63■□□□□ 0.41
CPSF2-203ENST00000554290 THOC6Q86W42 341 aaKnown RBP17.63■□□□□ 0.41
CPSF2-203ENST00000554290 LGI4Q8N135 537 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 NKAPQ8N5F7 415 aaKnown RBP17.63■□□□□ 0.41
CPSF2-203ENST00000554290 ANKRD7Q92527 254 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 TSNARE1Q96NA8 513 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 PTCHD1Q96NR3 888 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 AIF1LQ9BQI0 150 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 PELI2Q9HAT8 420 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 KLHL1Q9NR64 748 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 TRMT1Q9NXH9 659 aaKnown RBP17.63■□□□□ 0.41
CPSF2-203ENST00000554290 ANKRD10Q9NXR5 420 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 TEX264Q9Y6I9 313 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 KCNE2Q9Y6J6 123 aa17.63■□□□□ 0.41
CPSF2-203ENST00000554290 DIDO1Q9BTC0 2240 aaKnown RBP17.63■□□□□ 0.41
CPSF2-203ENST00000554290 GABRR3A8MPY1 467 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 PRMT3O60678 531 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 SAT1P21673 171 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 OLR1P78380 273 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 ALDH6A1Q02252 535 aaKnown RBP17.62■□□□□ 0.41
CPSF2-203ENST00000554290 MGAT5Q09328 741 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 SPINK14Q6IE38 97 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 SBSNQ6UWP8 590 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 RPTNQ6XPR3 784 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 RPS19BP1Q86WX3 136 aaKnown RBP17.62■□□□□ 0.41
CPSF2-203ENST00000554290 KLHL7Q8IXQ5 586 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 CYP4X1Q8N118 509 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 ZNF808Q8N4W9 903 aaPredicted RBP17.62■□□□□ 0.41
CPSF2-203ENST00000554290 FAM98AQ8NCA5 519 aaKnown RBP17.62■□□□□ 0.41
CPSF2-203ENST00000554290 UTP15Q8TED0 518 aaKnown RBP17.62■□□□□ 0.41
CPSF2-203ENST00000554290 THAP3Q8WTV1 239 aaPredicted RBP17.62■□□□□ 0.41
CPSF2-203ENST00000554290 ITLN2Q8WWU7 325 aaPredicted RBP17.62■□□□□ 0.41
CPSF2-203ENST00000554290 SCMH1Q96GD3 660 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 CCDC120Q96HB5 630 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 PWWP2AQ96N64 755 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 NPAS2Q99743 824 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 SPNS1Q9H2V7 528 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 CDCP1Q9H5V8 836 aa17.62■□□□□ 0.41
CPSF2-203ENST00000554290 SCN3AQ9NY46 2000 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 FAM227AF5H4B4 570 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 PSMD12O00232 456 aaPredicted RBP17.61■□□□□ 0.41
CPSF2-203ENST00000554290 SLC19A2O60779 497 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 DNAJB6O75190 326 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 B3GALT4O96024 378 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 SP1P08047 785 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 RNH1P13489 461 aaKnown RBP17.61■□□□□ 0.41
CPSF2-203ENST00000554290 ZNF37AP17032 561 aaPredicted RBP17.61■□□□□ 0.41
CPSF2-203ENST00000554290 RAB8AP61006 207 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 REEP5Q00765 189 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 RBBP5Q15291 538 aaKnown RBP17.61■□□□□ 0.41
CPSF2-203ENST00000554290 PPP1R3AQ16821 1122 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 NXPE4Q6UWF7 544 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 QSOX2Q6ZRP7 698 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 MRGPRGQ86SM5 289 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 SRRM1Q8IYB3 904 aaKnown RBP17.61■□□□□ 0.41
CPSF2-203ENST00000554290 ANKRD53Q8N9V6 530 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 ARMC2Q8NEN0 867 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 ELP5Q8TE02 316 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 MAGED4Q96JG8 741 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 EGFL8Q99944 293 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 SLC6A16Q9GZN6 736 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 SH3BGRL2Q9UJC5 107 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 IKZF3Q9UKT9 509 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 SLC22A14Q9Y267 594 aa17.61■□□□□ 0.41
CPSF2-203ENST00000554290 NBPF19A0A087WUL8 3843 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 CDC7O00311 574 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 MAN1A2O60476 641 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 SERPINA6P08185 405 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 ESRRAP11474 423 aaPredicted RBP17.6■□□□□ 0.41
CPSF2-203ENST00000554290 TNFRSF8P28908 595 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 HNF4AP41235 474 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 HNMTP50135 292 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 ST13P50502 369 aaKnown RBP17.6■□□□□ 0.41
CPSF2-203ENST00000554290 ITGA8P53708 1063 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 CDKL1Q00532 357 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 SLC25A25Q6KCM7 469 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 XKRXQ6PP77 449 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 TMPRSS11BQ86T26 416 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 ZC3HC1Q86WB0 502 aaKnown RBP17.6■□□□□ 0.41
CPSF2-203ENST00000554290 ANKMY2Q8IV38 441 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 VPS39Q96JC1 886 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 CAPZA3Q96KX2 299 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 GPR137Q96N19 417 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 HES7Q9BYE0 225 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 CHST11Q9NPF2 352 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms