RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 ZNF490Q9ULM2 529 aaPredicted RBP8.71□□□□□ -1.01
AL049839.2-201ENST00000553947 HSPB11Q9Y547 144 aa8.71□□□□□ -1.01
AL049839.2-201ENST00000553947 HELZP42694 1942 aaKnown RBP8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 MYO7AQ13402 2215 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 IGLV3-16A0A075B6K0 115 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 PABPN1LA6NDY0 278 aaKnown RBP8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 HMX3A6NHT5 357 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 G3V2T6 193 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 MANBAO00462 879 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 SLC9A3R1O14745 358 aaPredicted RBP8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 HS6ST1O60243 411 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 SLITRK5O94991 958 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 POP4O95707 220 aaKnown RBP8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 CYP2A6P11509 494 aaPredicted RBP8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 TYRP14679 529 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 FMO3P31513 532 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 RPIAP49247 311 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 EEFSECP57772 596 aaKnown RBP8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 KCNAB2Q13303 367 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 ZMYND11Q15326 602 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 GPAT3Q53EU6 434 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 PYCR3Q53H96 274 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 ZNF648Q5T619 568 aaPredicted RBP8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 METTL2BQ6P1Q9 378 aaKnown RBP8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 SUSD1Q6UWL2 747 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 RGL4Q8IZJ4 473 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 DPP10Q8N608 796 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 KRTCAP2Q8N6L1 136 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 IRF7Q92985 503 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 PYCR2Q96C36 320 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 ZNF300Q96RE9 604 aaPredicted RBP8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 APOL4Q9BPW4 351 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 PRDM8Q9NQV8 689 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 SCN3BQ9NY72 215 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 SLC25A13Q9UJS0 675 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 SNX7Q9UNH6 387 aa8.71□□□□□ -1.02
AL049839.2-201ENST00000553947 C5orf42Q9H799 3197 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 OR5K3A6NET4 321 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 AKR7A2O43488 359 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 AIREO43918 545 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 DFNA5O60443 496 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 STK16O75716 305 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 OR2B3O76000 313 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 TCF3P15923 654 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 EPB42P16452 691 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 PCMT1P22061 227 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 AOAHP28039 575 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 CBX5P45973 191 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 CBX2Q14781 532 aaPredicted RBP8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 CPSF6Q16630 551 aaKnown RBP eCLIP8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 LY6G5CQ5SRR4 150 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 ARSKQ6UWY0 536 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 HSD11B1LQ7Z5J1 315 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 EID3Q8N140 333 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 LIX1Q8N485 282 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 CLHC1Q8NHS4 586 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 LHFPL5Q8TAF8 219 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 NTMT1Q9BV86 223 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 ERVMER34-1Q9H9K5 563 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 RDH14Q9HBH5 336 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 ANKHQ9HCJ1 492 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 ARL15Q9NXU5 204 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 MRPL39Q9NYK5 338 aaKnown RBP8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 VAPAQ9P0L0 249 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 AASSQ9UDR5 926 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 GRIP1Q9Y3R0 1128 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 SNX8Q9Y5X2 465 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 KCNE2Q9Y6J6 123 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 PRAMEF4O60810 478 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 ULK1O75385 1050 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 ALPLP05186 524 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 CCNYL3P0C7X3 344 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 ERP29P30040 261 aaKnown RBP8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 PIGAP37287 484 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 PTPN5P54829 565 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 HTRA4P83105 476 aaPredicted RBP8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 BOP1Q14137 746 aaKnown RBP8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 ACOX1Q15067 660 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 TAB1Q15750 504 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 TTLL9Q3SXZ7 439 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 POM121L1PQ3SYA9 428 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 GARNL3Q5VVW2 1013 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 PRAMEF9Q5VWM5 478 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 SPESP1Q6UW49 350 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 GDPD4Q6W3E5 623 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 UBE2R2Q712K3 238 aaPredicted RBP8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 ZNF767PQ75MW2 155 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 ZNF540Q8NDQ6 660 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 SKA2Q8WVK7 121 aaPredicted RBP8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 AURKBQ96GD4 344 aaPredicted RBP8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 PPP3R2Q96LZ3 170 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 TRNT1Q96Q11 434 aaKnown RBP8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 MMP28Q9H239 520 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 IKZF5Q9H5V7 419 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 C11orf49Q9H6J7 331 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 TM9SF3Q9HD45 589 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 SPHK2Q9NRA0 654 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 TDP1Q9NUW8 608 aa8.7□□□□□ -1.02
AL049839.2-201ENST00000553947 CCDC59Q9P031 241 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms