RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 LRRC40Q9H9A6 602 aa12.84□□□□□ -0.35
PRPF39-204ENST00000553605 ABCF3Q9NUQ8 709 aa12.84□□□□□ -0.35
PRPF39-204ENST00000553605 TSR3Q9UJK0 312 aaKnown RBP12.84□□□□□ -0.35
PRPF39-204ENST00000553605 CAPN11Q9UMQ6 739 aa12.84□□□□□ -0.35
PRPF39-204ENST00000553605 DRG1Q9Y295 367 aaKnown RBP12.84□□□□□ -0.35
PRPF39-204ENST00000553605 NAALAD2Q9Y3Q0 740 aa12.84□□□□□ -0.35
PRPF39-204ENST00000553605 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.84□□□□□ -0.35
PRPF39-204ENST00000553605 CHD3Q12873 2000 aaKnown RBP12.84□□□□□ -0.35
PRPF39-204ENST00000553605 CUBNO60494 3623 aa12.83□□□□□ -0.35
PRPF39-204ENST00000553605 KCNE1BA0A087WTH5 132 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 PRMT5O14744 637 aaPredicted RBP12.83□□□□□ -0.36
PRPF39-204ENST00000553605 PSTPIP1O43586 416 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 GLSO94925 669 aaPredicted RBP12.83□□□□□ -0.36
PRPF39-204ENST00000553605 MATN4O95460 622 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 F12P00748 615 aaPredicted RBP12.83□□□□□ -0.36
PRPF39-204ENST00000553605 FHP07954 510 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 CTNNA2P26232 953 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 HSD17B2P37059 387 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 SSR4P51571 173 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 PNLIPRP1P54315 467 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.83□□□□□ -0.36
PRPF39-204ENST00000553605 MEI1Q5TIA1 1274 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 CCDC181Q5TID7 509 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 DARS2Q6PI48 645 aaKnown RBP12.83□□□□□ -0.36
PRPF39-204ENST00000553605 SEM1Q6ZVN7 128 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 ZNF534Q76KX8 674 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 LDB1Q86U70 411 aaPredicted RBP12.83□□□□□ -0.36
PRPF39-204ENST00000553605 RHOT2Q8IXI1 618 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 KCT2Q8NC54 265 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 PPFIBP2Q8ND30 876 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 OR5T3Q8NGG3 340 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 OR6P1Q8NGX9 317 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 ACTL9Q8TC94 416 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 PIGTQ969N2 578 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 TBC1D20Q96BZ9 403 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 PTCHD1Q96NR3 888 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 SLC2A6Q9UGQ3 507 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 FBXW2Q9UKT8 454 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 PCDHA3Q9Y5H8 950 aa12.83□□□□□ -0.36
PRPF39-204ENST00000553605 A0A0G2JMM0 328 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 TRBV11-1A0A0K0K1C0 115 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 A0A1W2PPB8 328 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 A0A1W2PRS3 328 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 ZNF860A6NHJ4 632 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 ZNF839A8K0R7 811 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 A8MUA0 341 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 A8MVJ9 347 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 KIR3DP1A8MWS1 328 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 MYO1CO00159 1063 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 SMAPO00193 183 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 B4GALT2O60909 372 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 IFNA2P01563 188 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 RBP3P10745 1247 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 JAK1P23458 1154 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 CLCN2P51788 898 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 EIF3EP60228 445 aaKnown RBP12.82□□□□□ -0.36
PRPF39-204ENST00000553605 RPS15AP62244 130 aaKnown RBP12.82□□□□□ -0.36
PRPF39-204ENST00000553605 SLC10A1Q14973 349 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 PARP6Q2NL67 630 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 GK5Q6ZS86 529 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 CAMKVQ8NCB2 501 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 APCDD1LQ8NCL9 501 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 NAXEQ8NCW5 288 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 TM4SF19Q96DZ7 209 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 PKP4Q99569 1192 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 EXO5Q9H790 373 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 IL1RL2Q9HB29 575 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 HPF1Q9NWY4 346 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 ZNF629Q9UEG4 869 aaPredicted RBP12.82□□□□□ -0.36
PRPF39-204ENST00000553605 ANAPC5Q9UJX4 755 aa12.82□□□□□ -0.36
PRPF39-204ENST00000553605 YARS2Q9Y2Z4 477 aaKnown RBP12.82□□□□□ -0.36
PRPF39-204ENST00000553605 ARID1AO14497 2285 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 ATP6AP2A0A1C7CYW4 349 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 E7ENX8 843 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 G3V3Y1 287 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 DNAJB6O75190 326 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 ATP6AP2O75787 350 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 CELA3AP09093 270 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 CNR1P21554 472 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 BTG2P78543 158 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 SORDQ00796 357 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 TAP2Q03519 686 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 AARS2Q5JTZ9 985 aaKnown RBP12.81□□□□□ -0.36
PRPF39-204ENST00000553605 TSTD2Q5T7W7 516 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 POMZP3Q6PJE2 187 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 IL20RBQ6UXL0 311 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 MAATS1Q7Z4T9 603 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 GPALPP1Q8IXQ4 340 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 KATNAL2Q8IYT4 538 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 TNIP2Q8NFZ5 429 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 KIAA1191Q96A73 305 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 THAP11Q96EK4 314 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 FAM118BQ9BPY3 351 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 FAM173AQ9BQD7 235 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 P2RY12Q9H244 342 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 TMEM184CQ9NVA4 438 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 SLC22A7Q9Y694 548 aa12.81□□□□□ -0.36
PRPF39-204ENST00000553605 ARHGAP21Q5T5U3 1957 aa12.8□□□□□ -0.36
PRPF39-204ENST00000553605 TRGV5A0A0B4J1U4 118 aa12.8□□□□□ -0.36
PRPF39-204ENST00000553605 MACROD2A1Z1Q3 448 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms