RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 PRPF4O43172 522 aaKnown RBP eCLIP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 ASNA1O43681 348 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 NEURL1O76050 574 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 STK10O94804 968 aaKnown RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 SEC24DO94855 1032 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 NADKO95544 446 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 C1orf105O95561 183 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 METTL18O95568 372 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 GOT2P00505 430 aaKnown RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 HPXP02790 462 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 EIF2S1P05198 315 aaKnown RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 CYC1P08574 325 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 C8orf89P0DMQ9 161 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 ERVK-10P10266 1014 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 ICAM2P13598 275 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 ABOP16442 354 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 PTPN7P35236 360 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 IST1P53990 364 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 EIF3EP60228 445 aaKnown RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 MAT1AQ00266 395 aaKnown RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 TEKQ02763 1124 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 ACVR1Q04771 509 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 FASTKQ14296 549 aaKnown RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 OR1C1Q15619 314 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 CCDC38Q502W7 563 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 GARNL3Q5VVW2 1013 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 ZNF425Q6IV72 752 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 C11orf63Q6NUN7 778 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 AFTPHQ6ULP2 937 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 GALNTL5Q7Z4T8 443 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 TGIF2LYQ8IUE0 185 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 KRT222Q8N1A0 295 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 GHDCQ8N2G8 530 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 TAB3Q8N5C8 712 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 CSNK1A1LQ8N752 337 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 ASZ1Q8WWH4 475 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 RAD51AP1Q96B01 352 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 MMABQ96EY8 250 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 OR2A5Q96R48 311 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 FOXC2Q99958 501 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 PLCD4Q9BRC7 762 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 DPH7Q9BTV6 452 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 CARD6Q9BX69 1037 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 LRRC40Q9H9A6 602 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 NHEJ1Q9H9Q4 299 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 KLHL1Q9NR64 748 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 ABHD10Q9NUJ1 306 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 ANKRD10Q9NXR5 420 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 IFNKQ9P0W0 207 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 SPATA7Q9P0W8 599 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 SLC2A6Q9UGQ3 507 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 INTUQ9ULD6 942 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 SLC39A10Q9ULF5 831 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 CDC14AQ9UNH5 594 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 EFR3BQ9Y2G0 817 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 R3HDM2Q9Y2K5 976 aaKnown RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 RTTNQ86VV8 2226 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 A0A1B0GTL3 188 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 PHF2O75151 1096 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 FAM155BO75949 473 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 TOXO94900 526 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 MLYCDO95822 493 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 TSPAN12O95859 305 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 APOA4P06727 396 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 MYBL2P10244 700 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 ZNF24P17028 368 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 EEF1DP29692 281 aaKnown RBP6.84□□□□□ -1.31
ATXN3-219ENST00000553488 PTGER1P34995 402 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 CTNNA1P35221 906 aaKnown RBP6.84□□□□□ -1.31
ATXN3-219ENST00000553488 RNF4P78317 190 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 EGR3Q06889 387 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 GBX1Q14549 363 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 NAA25Q14CX7 972 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 KCNMB1Q16558 191 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 PARP6Q2NL67 630 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 BTBD16Q32M84 506 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.84□□□□□ -1.31
ATXN3-219ENST00000553488 SPINK14Q6IE38 97 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 LRRC8BQ6P9F7 803 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 CPEB2Q7Z5Q1 589 aaKnown RBP6.84□□□□□ -1.31
ATXN3-219ENST00000553488 ZNF227Q86WZ6 799 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 TMEM178AQ8NBL3 297 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 OR8K1Q8NGG5 319 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 CA5BP1Q8WTZ4 195 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 HDAC10Q969S8 669 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 KIRREL1Q96J84 757 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 ZNF354BQ96LW1 612 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 ZNF778Q96MU6 729 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 GBP4Q96PP9 640 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 FERMT1Q9BQL6 677 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 OSBPL8Q9BZF1 889 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 DRC3Q9H069 523 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 P2RY12Q9H244 342 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 RIMKLBQ9ULI2 386 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 PPT2Q9UMR5 302 aa6.84□□□□□ -1.31
ATXN3-219ENST00000553488 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.84□□□□□ -1.31
ATXN3-219ENST00000553488 FBN1P35555 2871 aaKnown RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 NKX2-6A6NCS4 301 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 OR2W5A6NFC9 320 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 GABRR3A8MPY1 467 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms