RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 RANBP10Q6VN20 620 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 WDR53Q7Z5U6 358 aaPredicted RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 ANKRD37Q7Z713 158 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 RPS19BP1Q86WX3 136 aaKnown RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 WFDC3Q8IUB2 231 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 LIX1LQ8IVB5 337 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 CIARTQ8N365 385 aaPredicted RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 SLC5A8Q8N695 610 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 POGLUT1Q8NBL1 392 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 OR2L3Q8NG85 312 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 OR5M9Q8NGP3 310 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 M1APQ8TC57 530 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 LKAAEAR1Q8TD35 194 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 TMEM125Q96AQ2 219 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 HAUS1Q96CS2 278 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 MVB12AQ96EY5 273 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 COX4I2Q96KJ9 171 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 ZFYVE21Q9BQ24 234 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 GORASP1Q9BQQ3 440 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 PLCD4Q9BRC7 762 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 DPH7Q9BTV6 452 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 ACAT2Q9BWD1 397 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 DRC3Q9H069 523 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 DEFB127Q9H1M4 99 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 C10orf88Q9H8K7 445 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 SYNPO2LQ9H987 977 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 MMP25Q9NPA2 562 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 MBNL3Q9NUK0 354 aaKnown RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 TENM1Q9UKZ4 2725 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 A0A0G2JNJ9 132 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 A0A1W2PPV9 198 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 OR51F1A6NGY5 319 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 QSOX1O00391 747 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 P2RX6O15547 441 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 PEX1O43933 1283 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 OR1I1O60431 355 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 CST8O60676 142 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 VPS26AO75436 327 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 TSPAN15O95858 294 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 RPN2P04844 631 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 RPLP1P05386 114 aaKnown RBP5.02□□□□□ -1.61
HOXB3-213ENST00000552000 OR56A5P0C7T3 313 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 GLI4P10075 376 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 ATF4P18848 351 aaPredicted RBP5.02□□□□□ -1.61
HOXB3-213ENST00000552000 ACVR2AP27037 513 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 PSMB4P28070 264 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 TPP2P29144 1249 aaPredicted RBP5.02□□□□□ -1.61
HOXB3-213ENST00000552000 UQCRC1P31930 480 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 XCR1P46094 333 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 AVPR1BP47901 424 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 CYB561P49447 251 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 ITGA8P53708 1063 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 GPR85P60893 370 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 NKX6-1P78426 367 aaPredicted RBP5.02□□□□□ -1.61
HOXB3-213ENST00000552000 ITIH4Q14624 930 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 EXT1Q16394 746 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 SLC25A35Q3KQZ1 300 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 CCSMST1Q4G0I0 132 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 GXYLT1Q4G148 440 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 FLYWCH1Q4VC44 716 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 Q5PR19 223 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 GARNL3Q5VVW2 1013 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 SHEQ5VZ18 495 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 ZNF585AQ6P3V2 769 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 PACS1Q6VY07 963 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 B3GNT6Q6ZMB0 384 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 BZW1Q7L1Q6 419 aaKnown RBP5.02□□□□□ -1.61
HOXB3-213ENST00000552000 ZNF227Q86WZ6 799 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 VSIG1Q86XK7 387 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 CCDC50Q8IVM0 306 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 SULF2Q8IWU5 870 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 PHC2Q8IXK0 858 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 SLC22A15Q8IZD6 547 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 KIF2BQ8N4N8 673 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 OR52N2Q8NGI0 321 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 OR2A1Q8NGT9 310 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 OR9A4Q8NGU2 314 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 FAM222BQ8WU58 562 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 SLCO2A1Q92959 643 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 TSLPQ969D9 159 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 CDKN2AIPNLQ96HQ2 116 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 SPATA13Q96N96 652 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 QKIQ96PU8 341 aaKnown RBP eCLIP5.02□□□□□ -1.61
HOXB3-213ENST00000552000 VAT1Q99536 393 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 TBL1YQ9BQ87 522 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 TTYH2Q9BSA4 534 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 RAB11FIP5Q9BXF6 653 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 PACSIN1Q9BY11 444 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 ATG10Q9H0Y0 220 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 GBA3Q9H227 469 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 HSD3B7Q9H2F3 369 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 PNPLA3Q9NST1 481 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 NLE1Q9NVX2 485 aaPredicted RBP5.02□□□□□ -1.61
HOXB3-213ENST00000552000 HCN3Q9P1Z3 774 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 UVRAGQ9P2Y5 699 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 Q9UFV3 132 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 TRPS1Q9UHF7 1281 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 ADAMTS6Q9UKP5 1117 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 TRHDEQ9UKU6 1024 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 CBLCQ9ULV8 474 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms