RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 RNF10Q8N5U6 811 aaKnown RBP13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 MFSD9Q8NBP5 474 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 OR5T3Q8NGG3 340 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 LILRB4Q8NHJ6 448 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 RND1Q92730 232 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 DEFB126Q9BYW3 111 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 NPDC1Q9NQX5 325 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 KCNN3Q9UGI6 736 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 RNF6Q9Y252 685 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 NKX2-6A6NCS4 301 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 SAGE2PA6NJ88 616 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 PEX1O43933 1283 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 LCMT2O60294 686 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 GALR3O60755 368 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 B4GALT2O60909 372 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 CDH1P12830 882 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 TFEBP19484 476 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 MSX1P28360 303 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 ZNF75DP51815 510 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 PWP1Q13610 501 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 DHX34Q14147 1143 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 ARHGAP11AQ6P4F7 1023 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 AGTRAPQ6RW13 159 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 ACAD11Q709F0 780 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 ZNF227Q86WZ6 799 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 SULF2Q8IWU5 870 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 PALM2Q8IXS6 379 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 DMRTC2Q8IXT2 367 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 CPNE9Q8IYJ1 553 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 MARVELD2Q8N4S9 558 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 AFAP1L2Q8N4X5 818 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 ZNF740Q8NDX6 193 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 CD200R1Q8TD46 325 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 ALKBH8Q96BT7 664 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 PTCHD1Q96NR3 888 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 GPR21Q99679 349 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 DESI2Q9BSY9 194 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 FBXO6Q9NRD1 293 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 SH2B3Q9UQQ2 575 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 ZKSCAN5Q9Y2L8 839 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 MED16Q9Y2X0 877 aa13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 ZNF469Q96JG9 3925 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-210ENST00000551981 FAM237BA0A1B0GVD1 139 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 MAGEB16A2A368 324 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 CHST10O43529 356 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 HS6ST1O60243 411 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 AVILO75366 819 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 ZWINTO95229 277 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 C8GP07360 202 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 CD99P14209 185 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 ALOX12P18054 663 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 RFC3P40938 356 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 CCR8P51685 355 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 TFF3Q07654 80 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 RGS1Q08116 209 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 CTBP1Q13363 440 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 NAE1Q13564 534 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 DEFB134Q4QY38 66 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 CMPK2Q5EBM0 449 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 ZNF549Q6P9A3 640 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 PAOXQ6QHF9 649 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 LCTLQ6UWM7 567 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 QSOX2Q6ZRP7 698 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 ABHD13Q7L211 337 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 DENND6AQ8IWF6 608 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 LMNTD2Q8IXW0 634 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 CYP4Z2PQ8N1L4 340 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 ARMC10Q8N2F6 343 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 TMEM156Q8N614 296 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 CHDHQ8NE62 594 aaPredicted RBP13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 C16orf52Q8NHV5 167 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 ZNF669Q96BR6 464 aaPredicted RBP13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 HAUS8Q9BT25 410 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 ATG10Q9H0Y0 220 aa13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 CLK4Q9HAZ1 481 aaKnown RBP13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 TRMT6Q9UJA5 497 aaKnown RBP13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 PHF3Q92576 2039 aaKnown RBP13.27□□□□□ -0.29
CHMP1A-210ENST00000551981 TCRBV7S3A2A0A539 114 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 PABPN1LA6NDY0 278 aaKnown RBP13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 PSMD12O00232 456 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 OR1F1O43749 312 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 CEP104O60308 925 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 TOXO94900 526 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 SERPIND1P05546 499 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 HOXD4P09016 255 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 HIST1H2AGP0C0S8 130 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 HIST1H2ADP20671 130 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 DNAJA1P31689 397 aaKnown RBP13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 SLC1A2P43004 574 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 RGS4P49798 205 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 OLR1P78380 273 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 MYBPHQ13203 477 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 SP140Q13342 867 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 SIX1Q15475 284 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 UGT3A1Q6NUS8 523 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 CLYBLQ8N0X4 340 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 ZFP62Q8NB50 900 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 CALML6Q8TD86 181 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 MAIP1Q8WWC4 291 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms