RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 TMEM150CB9EJG8 249 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 F8VVB4 439 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 F8VWA3 439 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 SLC33A1O00400 549 aaPredicted RBP4.38□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF263O14978 683 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 PCDH7O60245 1069 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 GLRA3O75311 464 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 CDK2AP2O75956 126 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 NADKO95544 446 aaPredicted RBP4.38□□□□□ -1.71
LIMA1-205ENST00000550592 MOCS2O96007 188 aaPredicted RBP4.38□□□□□ -1.71
LIMA1-205ENST00000550592 NGFP01138 241 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 STAG3L1P0CL83 205 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 DARSP14868 501 aaKnown RBP4.38□□□□□ -1.71
LIMA1-205ENST00000550592 ASIC1P78348 528 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 CDR2Q01850 454 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 HNRNPA0Q13151 305 aaKnown RBP4.38□□□□□ -1.71
LIMA1-205ENST00000550592 MORF4L2Q15014 288 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 CCDC6Q16204 474 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 GPR33Q49SQ1 333 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 SLC25A53Q5H9E4 307 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 GLRA4Q5JXX5 417 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 SLC10A5Q5PT55 438 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 CEACAM20Q6UY09 585 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 G2E3Q7L622 706 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 CCDC91Q7Z6B0 441 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 CREBRFQ8IUR6 639 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 SYCP3Q8IZU3 236 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 OR13C3Q8NGS6 347 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 CTCFLQ8NI51 663 aaPredicted RBP4.38□□□□□ -1.71
LIMA1-205ENST00000550592 TEKT1Q969V4 418 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 TSACCQ96A04 125 aaPredicted RBP4.38□□□□□ -1.71
LIMA1-205ENST00000550592 SNRNP40Q96DI7 357 aaKnown RBP4.38□□□□□ -1.71
LIMA1-205ENST00000550592 NODALQ96S42 347 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 PITPNM3Q9BZ71 974 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 MAN1B1Q9UKM7 699 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 ICAM5Q9UMF0 924 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 KCNJ14Q9UNX9 436 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 LRP12Q9Y561 859 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 KLK4Q9Y5K2 254 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 INSRP06213 1382 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 ROCK1Q13464 1354 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 CACNA1GO43497 2377 aa4.38□□□□□ -1.71
LIMA1-205ENST00000550592 TTC28Q96AY4 2481 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 AKAP11Q9UKA4 1901 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 TRBV5-5A0A0J9YX44 114 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 C17orf105B2RV13 164 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 KBTBD13C9JR72 458 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 KLF11O14901 512 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 GOSR1O95249 250 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 BAG3O95817 575 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 CLPTM1O96005 669 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 GPIP06744 558 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 ITIH1P19827 911 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 ALDH4A1P30038 563 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 CCND3P30281 292 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-205ENST00000550592 FRKP42685 505 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-205ENST00000550592 SNU13P55769 128 aaKnown RBP4.37□□□□□ -1.71
LIMA1-205ENST00000550592 ST8SIA6P61647 398 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 IL10RBQ08334 325 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 SQLEQ14534 574 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF674Q2M3X9 581 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 SMU1Q2TAY7 513 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 KBTBD12Q3ZCT8 623 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 ODF2Q5BJF6 829 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF789Q5FWF6 425 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 CCDC158Q5M9N0 1113 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 CTR9Q6PD62 1173 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 PRSS55Q6UWB4 352 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-205ENST00000550592 GPR141Q7Z602 305 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 MEX3DQ86XN8 651 aaKnown RBP4.37□□□□□ -1.71
LIMA1-205ENST00000550592 UNC45BQ8IWX7 931 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 KIRREL3Q8IZU9 778 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF713Q8N859 430 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-205ENST00000550592 CENPTQ96BT3 561 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 GIMAP5Q96F15 307 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 C4orf45Q96LM5 186 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 HNRNPABQ99729 332 aaKnown RBP4.37□□□□□ -1.71
LIMA1-205ENST00000550592 LSG1Q9H089 658 aaKnown RBP4.37□□□□□ -1.71
LIMA1-205ENST00000550592 RIMS4Q9H426 269 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-205ENST00000550592 SDF2L1Q9HCN8 221 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 IL1RAPL2Q9NP60 686 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 PHPT1Q9NRX4 125 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-205ENST00000550592 DNAJC17Q9NVM6 304 aaKnown RBP4.37□□□□□ -1.71
LIMA1-205ENST00000550592 CNIH4Q9P003 139 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 PROCRQ9UNN8 238 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 TNNQ9UQP3 1299 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 RNF123Q5XPI4 1314 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 TOGARAM1Q9Y4F4 1720 aa4.37□□□□□ -1.71
LIMA1-205ENST00000550592 DOT1LQ8TEK3 1739 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 ADAMTSL1Q8N6G6 1762 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 A0A0B4J203 849 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 ILVBLA1L0T0 632 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 LRRD1A4D1F6 860 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 PMS2P5A8MQ11 134 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 PRSS46E5RG02 174 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 FAM72CH0Y354 149 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 BLOC1S5-TXNDC5H3BN57 136 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF197O14709 1029 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 EML2O95834 649 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms