RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 LRRC39Q96DD0 335 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 CERS2Q96G23 380 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 CFAP36Q96G28 342 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 IMMP1LQ96LU5 166 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 NDNQ99608 321 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 DRC3Q9H069 523 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 ZNF358Q9NW07 568 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 STMN3Q9NZ72 180 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 STOX2Q9P2F5 926 aaPredicted RBP11.49□□□□□ -0.57
DDX54-206ENST00000549271 NPIPA1Q9UND3 350 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 SNX24Q9Y343 169 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 ASB1Q9Y576 335 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 PHF3Q92576 2039 aaKnown RBP11.48□□□□□ -0.57
DDX54-206ENST00000549271 NKX2-6A6NCS4 301 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 EFCAB8A8MWE9 144 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 E7ENX8 843 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 E7ESA3 106 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 ZWINTO95229 277 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 TSPAN12O95859 305 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 SLC16A8O95907 504 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 HEXBP07686 556 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 UQCRHP07919 91 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 ANXA5P08758 320 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 ENO3P13929 434 aaPredicted RBP11.48□□□□□ -0.57
DDX54-206ENST00000549271 SKIV2L2P42285 1042 aaKnown RBP11.48□□□□□ -0.57
DDX54-206ENST00000549271 PGGT1BP53609 377 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 ARL4CP56559 192 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 TAP2Q03519 686 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 EEF1A2Q05639 463 aaKnown RBP11.48□□□□□ -0.57
DDX54-206ENST00000549271 ZNF33BQ06732 778 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 FRG1Q14331 258 aaKnown RBP11.48□□□□□ -0.57
DDX54-206ENST00000549271 FASTKD3Q14CZ7 662 aaKnown RBP11.48□□□□□ -0.57
DDX54-206ENST00000549271 SYT10Q6XYQ8 523 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 KIAA0408Q6ZU52 694 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 PIWIL4Q7Z3Z4 852 aaKnown RBP11.48□□□□□ -0.57
DDX54-206ENST00000549271 FGD2Q7Z6J4 655 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 ANKMY2Q8IV38 441 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 ZC3H7AQ8IWR0 971 aaKnown RBP11.48□□□□□ -0.57
DDX54-206ENST00000549271 GHDCQ8N2G8 530 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 MARVELD2Q8N4S9 558 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 AMER2Q8N7J2 671 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 MDS2Q8NDY4 140 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 SPATA4Q8NEY3 305 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 LILRB4Q8NHJ6 448 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 ZNF480Q8WV37 535 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 EEF1AKMT1Q8WVE0 214 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 RERGQ96A58 199 aaPredicted RBP11.48□□□□□ -0.57
DDX54-206ENST00000549271 MMABQ96EY8 250 aaPredicted RBP11.48□□□□□ -0.57
DDX54-206ENST00000549271 FRMD6Q96NE9 622 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 TUBB6Q9BUF5 446 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 DNAJB12Q9NXW2 375 aaKnown RBP11.48□□□□□ -0.57
DDX54-206ENST00000549271 TAC3Q9UHF0 121 aa11.48□□□□□ -0.57
DDX54-206ENST00000549271 MXRA5Q9NR99 2828 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 KCNE1BA0A087WTH5 132 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 A0A0A6YYC8 382 aaPredicted RBP11.47□□□□□ -0.57
DDX54-206ENST00000549271 H0YIG0 161 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 I3L1I5 382 aaPredicted RBP11.47□□□□□ -0.57
DDX54-206ENST00000549271 EIF3FO00303 357 aaPredicted RBP11.47□□□□□ -0.57
DDX54-206ENST00000549271 PRRG2O14669 202 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 PROM1O43490 865 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 RAD51CO43502 376 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 CTAG2O75638 210 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 HRH2P25021 359 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 CASQ1P31415 396 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 MEOX1P50221 254 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 EFNA3P52797 238 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 HSF1Q00613 529 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 PDIA2Q13087 525 aaKnown RBP11.47□□□□□ -0.57
DDX54-206ENST00000549271 NDUFA9Q16795 377 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 PAQR3Q6TCH7 311 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 UBE2R2Q712K3 238 aaPredicted RBP11.47□□□□□ -0.57
DDX54-206ENST00000549271 PPFIBP2Q8ND30 876 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 ASB5Q8WWX0 329 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 SCMH1Q96GD3 660 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 C18orf12Q96KH6 178 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 SIGLEC12Q96PQ1 595 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 ERP44Q9BS26 406 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 UCK2Q9BZX2 261 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 SLC24A3Q9HC58 644 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 TAS2R13Q9NYV9 303 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 MOCS1Q9NZB8 636 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 TRMT6Q9UJA5 497 aaKnown RBP11.47□□□□□ -0.57
DDX54-206ENST00000549271 ADAMTS6Q9UKP5 1117 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 MKL2Q9ULH7 1088 aa11.47□□□□□ -0.57
DDX54-206ENST00000549271 FAM187AA6NFU0 413 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 FAM90A27PA6NNH2 459 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 FFAR3O14843 346 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 HAT1O14929 419 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 GPR42O15529 346 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 P2RX6O15547 441 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 ZBTB14O43829 449 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 NSA2O95478 260 aaKnown RBP11.46□□□□□ -0.57
DDX54-206ENST00000549271 C8orf89P0DMQ9 161 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 IMPA1P29218 277 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 CHRNB4P30926 498 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 AVPR1BP47901 424 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 C2orf54Q08AI8 447 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 MYBPHQ13203 477 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 HECTD2Q5U5R9 776 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 DUPD1Q68J44 220 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms