RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 TRIM60Q495X7 471 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 TNFAIP8L2Q6P589 184 aaPredicted RBP11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 NPAS3Q8IXF0 933 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 CELF5Q8N6W0 485 aaKnown RBP11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 CYB5D2Q8WUJ1 264 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 MYDGFQ969H8 173 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 SLC35A5Q9BS91 424 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 RIOK2Q9BVS4 552 aaKnown RBP11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 CEP44Q9C0F1 390 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 RDH14Q9HBH5 336 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 DNAJC27Q9NZQ0 273 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 PCDHGB1Q9Y5G3 927 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 DNMT3AQ9Y6K1 912 aaPredicted RBP11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 TRBV5-4A0A0C4DH59 114 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 ZNF821O75541 412 aaPredicted RBP11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 CCNKO75909 580 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 C1SP09871 688 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 ADORA3P0DMS8 318 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 SOX3P41225 446 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 ALDH9A1P49189 494 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 SNRPD1P62314 119 aaKnown RBP11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 NKX3-2P78367 333 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 GPNMBQ14956 572 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 RPS26P11Q5JNZ5 115 aaPredicted RBP11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 SPANXN2Q5MJ10 180 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 DEPDC1Q5TB30 811 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 PTCHD4Q6ZW05 846 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 TSEN54Q7Z6J9 526 aaKnown RBP11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 TMEM150AQ86TG1 271 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 DNAJC22Q8N4W6 341 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 ZNF740Q8NDX6 193 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 B3GNT7Q8NFL0 401 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 DOHHQ9BU89 302 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 BEX2Q9BXY8 128 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 PSORS1C1Q9UIG5 152 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 LSM7Q9UK45 103 aaKnown RBP11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 MYO10Q9HD67 2058 aa11.91□□□□□ -0.5
SLC38A1-206ENST00000549049 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 CLCA1A8K7I4 914 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 NEDD8-MDP1E9PL57 170 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 LOC110117498-PIK3R3F6TDL0 507 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 H3BN98 237 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 GCM2O75603 506 aaPredicted RBP11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 RPLP2P05387 115 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 PSMA3P25788 255 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 HNF4AP41235 474 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 C2orf80Q0P641 193 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 C10orf62Q5T681 223 aaPredicted RBP11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 SLC8B1Q6J4K2 584 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 HSD11B1LQ7Z5J1 315 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 AQP11Q8NBQ7 271 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 UBTD2Q8WUN7 234 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 STARD8Q92502 1023 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 RAB8BQ92930 207 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 TMEM159Q96B96 161 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 SCRN2Q96FV2 425 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 CEP295NLQ96MC4 621 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 OR4K3Q96R72 315 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 FAM129BQ96TA1 746 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 RUVBL1Q9Y265 456 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 MED26O95402 600 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 STATHP02808 62 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 ADRA2AP08913 450 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 XPAP23025 273 aaPredicted RBP11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 ACVR2AP27037 513 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 HLA-FP30511 346 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 GRK3P35626 688 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 SCARB2Q14108 478 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 UBE2UQ5VVX9 321 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 ERICH5Q6P6B1 374 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 GPR65Q8IYL9 337 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 SLC34A3Q8N130 599 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 OR7G3Q8NG95 312 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 WDR48Q8TAF3 677 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 FBLIM1Q8WUP2 373 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 TMEM169Q96HH4 297 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 HRASLS5Q96KN8 279 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 TIGARQ9NQ88 270 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 SNTG1Q9NSN8 517 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 ZNF226Q9NYT6 803 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 ITM2BQ9Y287 266 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 PRKAB1Q9Y478 270 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 A0A0C4DFX4 3053 aa11.9□□□□□ -0.5
SLC38A1-206ENST00000549049 PRAMEF33A0A0G2JMD5 474 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 A0A0G2JN53 185 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 PRAMEF25A6NGN4 478 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 RTCAO00442 366 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 SCAMP2O15127 329 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 PRAMEF10O60809 474 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 DNAJB5O75953 348 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 C8GP07360 202 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 GGT2P36268 569 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 PIK3CBP42338 1070 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 SLC6A12P48065 614 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 SPINT3P49223 89 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 EPHB3P54753 998 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 CXCR4P61073 352 aa11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 CSTF3Q12996 717 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-206ENST00000549049 DOC2BQ14184 412 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms