RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ATXN10Q9UBB4 475 aa19.15■□□□□ 0.66
CTDSP2-204ENST00000548823 PTGDR2Q9Y5Y4 395 aa19.15■□□□□ 0.66
CTDSP2-204ENST00000548823 SHANK1Q9Y566 2161 aa19.14■□□□□ 0.66
CTDSP2-204ENST00000548823 HIVEP3Q5T1R4 2406 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 SERTM1A2A2V5 107 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 UGDHO60701 494 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 CLDN9O95484 217 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 CLDN1O95832 211 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 PCCBP05166 539 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 KELP23276 732 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 GDF5P43026 501 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 ACTR3P61158 418 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 EMX2Q04743 252 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 RPA4Q13156 261 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 ART3Q13508 389 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 KPNB1Q14974 876 aaKnown RBP19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 ATP6AP1LQ52LC2 224 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 C6orf136Q5SQH8 315 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 MBOAT1Q6ZNC8 495 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 GK5Q6ZS86 529 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 TIPARPQ7Z3E1 657 aaKnown RBP19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 TRIM46Q7Z4K8 759 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 GALNT13Q8IUC8 556 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 FBXW8Q8N3Y1 598 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 BMPERQ8N8U9 685 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 L3MBTL4Q8NA19 623 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 OR2L2Q8NH16 312 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 PPP3R2Q96LZ3 170 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 CDK15Q96Q40 435 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 DNAJC11Q9NVH1 559 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 ZIM2Q9NZV7 527 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 CSMD1Q96PZ7 3565 aa19.14■□□□□ 0.65
CTDSP2-204ENST00000548823 MGAT4DA6NG13 374 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 ARHGEF33A8MVX0 844 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 NPIPB8E9PQR5 432 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 CACNB4O00305 520 aaPredicted RBP19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 NRP2O60462 931 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 CD1EP15812 388 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 EPORP19235 508 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 LRP8Q14114 963 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 ZXDCQ2QGD7 858 aaPredicted RBP19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 PTCHD3Q3KNS1 767 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 FUNDC1Q8IVP5 155 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 OR2T11Q8NH01 316 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 ZDHHC1Q8WTX9 485 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 WDR60Q8WVS4 1066 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 ZPBPQ9BS86 351 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 TEX101Q9BY14 249 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 ZNF768Q9H5H4 540 aaKnown RBP19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 CCDC167Q9P0B6 97 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 NDUFAF1Q9Y375 327 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 CCL27Q9Y4X3 112 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 TMEM184BQ9Y519 407 aaPredicted RBP19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 PCDHB3Q9Y5E6 796 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 POLQO75417 2590 aa19.13■□□□□ 0.65
CTDSP2-204ENST00000548823 DYTNA2CJ06 578 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 RGS14O43566 566 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 ENTPD5O75356 428 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 KRT6AP02538 564 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 KRT6BP04259 564 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 ZNF8P17098 575 aaPredicted RBP19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 TRIM23P36406 574 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 ARL1P40616 181 aaPredicted RBP19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 KRT6CP48668 564 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 HTR6P50406 440 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 ABRQ12979 859 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 MAD2L1Q13257 205 aaPredicted RBP19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 RPS6KA2Q15349 733 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 NKAIN2Q5VXU1 208 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 REP15Q6BDI9 236 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 CEACAM20Q6UY09 585 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 BNC2Q6ZN30 1099 aaPredicted RBP19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 TRAPPC5Q8IUR0 188 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 PLA2G15Q8NCC3 412 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 ROPN1LQ96C74 230 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 CLPTM1LQ96KA5 538 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 WDR41Q9HAD4 459 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 ASIC5Q9NY37 505 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 MAP4K5Q9Y4K4 846 aa19.12■□□□□ 0.65
CTDSP2-204ENST00000548823 KCNE1BA0A087WTH5 132 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 WIPF3A6NGB9 483 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 MANBAO00462 879 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 FBP2O00757 339 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 LSM1O15116 133 aaKnown RBP19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 ULK1O75385 1050 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 HOXC4P09017 264 aaPredicted RBP19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 CDK3Q00526 305 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 MC2RQ01718 297 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 BIRC2Q13490 618 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 MMEL1Q495T6 779 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 C1QL3Q5VWW1 255 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 TMEM71Q6P5X7 295 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 AAGABQ6PD74 315 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 PAOXQ6QHF9 649 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 BLOC1S3Q6QNY0 202 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 ZNF547Q8IVP9 402 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 SFRP1Q8N474 314 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 PCYOX1LQ8NBM8 494 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 OR56A3Q8NH54 315 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms