RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 MFSD4BQ5TF39 518 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 BBS7Q8IWZ6 715 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 OR9Q2Q8NGE9 314 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 HIST1H2AHQ96KK5 128 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 FYTTD1Q96QD9 318 aaKnown RBP22.24■■□□□ 1.15
NPAS3-206ENST00000548645 HIST1H2AJQ99878 128 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 H2AFJQ9BTM1 129 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 GON7Q9BXV9 100 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 HHATLQ9HCP6 504 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 BTNL2Q9UIR0 455 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 H3BM21 787 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 TRBC1P01850 177 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 SGSHP51688 502 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 C21orf58P58505 322 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 PCDH1Q08174 1060 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 SMARCB1Q12824 385 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 HYAL2Q12891 473 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 PTCHD3Q3KNS1 767 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 SMUG1Q53HV7 270 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 NAGSQ8N159 534 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 PIH1D2Q8WWB5 315 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 MAGEB10Q96LZ2 347 aaPredicted RBP22.24■■□□□ 1.15
NPAS3-206ENST00000548645 COPS8Q99627 209 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 SNTG1Q9NSN8 517 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 SEC14L4Q9UDX3 406 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 SLC6A14Q9UN76 642 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 RUVBL1Q9Y265 456 aaKnown RBP22.24■■□□□ 1.15
NPAS3-206ENST00000548645 PRG3Q9Y2Y8 225 aaPredicted RBP22.24■■□□□ 1.15
NPAS3-206ENST00000548645 CMAHPQ9Y471 501 aa22.24■■□□□ 1.15
NPAS3-206ENST00000548645 C1orf226A1L170 272 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 OPN1SWP03999 348 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 PIPP12273 146 aaPredicted RBP22.23■■□□□ 1.15
NPAS3-206ENST00000548645 CHMP24386 653 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 PSMA1P25786 263 aaKnown RBP22.23■■□□□ 1.15
NPAS3-206ENST00000548645 C19orf57Q0VDD7 668 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 ZXDCQ2QGD7 858 aaPredicted RBP22.23■■□□□ 1.15
NPAS3-206ENST00000548645 GPR33Q49SQ1 333 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 Q5BKY6 102 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 C16orf59Q7L2K0 433 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 VWA5B2Q8N398 1253 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 VANGL1Q8TAA9 524 aaPredicted RBP22.23■■□□□ 1.15
NPAS3-206ENST00000548645 SPATA17Q96L03 361 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.23■■□□□ 1.15
NPAS3-206ENST00000548645 TRIM39Q9HCM9 518 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 ACOXLQ9NUZ1 547 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 HCN4Q9Y3Q4 1203 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 AOAHP28039 575 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 MLLT3P42568 568 aaPredicted RBP22.23■■□□□ 1.15
NPAS3-206ENST00000548645 OR1E2P47887 323 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 SLC6A12P48065 614 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 CHRNA6Q15825 494 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 MORN1Q5T089 497 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 RDH10Q8IZV5 341 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 RNF175Q8N4F7 328 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 PARK7Q99497 189 aaKnown RBP22.23■■□□□ 1.15
NPAS3-206ENST00000548645 VPS29Q9UBQ0 182 aa22.23■■□□□ 1.15
NPAS3-206ENST00000548645 TMEM189-UBE2V1I3L0A0 370 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 POU2F1P14859 743 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 MYL9P24844 172 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 HNMTP50135 292 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 P2RX3P56373 397 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 ATXN7L2Q5T6C5 722 aaPredicted RBP22.22■■□□□ 1.15
NPAS3-206ENST00000548645 CPTPQ5TA50 214 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 GLB1LQ6UWU2 654 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 ZNF598Q86UK7 904 aaKnown RBP22.22■■□□□ 1.15
NPAS3-206ENST00000548645 NLRP8Q86W28 1048 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 CACTIN-AS1Q8N1I8 211 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 ANGPTL6Q8NI99 470 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 THSD1Q9NS62 852 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 DNAJC11Q9NVH1 559 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 GABRQQ9UN88 632 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 IQCMA0A1B0GVH7 501 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 MYADML2A6NDP7 307 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 SCAMP2O15127 329 aaKnown RBP22.22■■□□□ 1.15
NPAS3-206ENST00000548645 IGHA2P01877 340 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 JUPP14923 745 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 ENDOUP21128 410 aaKnown RBP22.22■■□□□ 1.15
NPAS3-206ENST00000548645 CCL14Q16627 93 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 NXPE1Q8N323 547 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 GTPBP3Q969Y2 492 aaKnown RBP22.22■■□□□ 1.15
NPAS3-206ENST00000548645 COQ8BQ96D53 544 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 FRMD6Q96NE9 622 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 FAM129BQ96TA1 746 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 SLC12A9Q9BXP2 914 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 RACGAP1Q9H0H5 632 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 SLC22A14Q9Y267 594 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 PIKFYVEQ9Y2I7 2098 aa22.22■■□□□ 1.15
NPAS3-206ENST00000548645 INPPL1O15357 1258 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 PCDH7O60245 1069 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 ACSM2AQ08AH3 577 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 CHIT1Q13231 466 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 ANXA8L1Q5VT79 327 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 ACSM2BQ68CK6 577 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 FAM131AQ6UXB0 335 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 NPAS3Q8IXF0 933 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 CADM2Q8N3J6 435 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 C19orf43Q9BQ61 176 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 KLHL42Q9P2K6 505 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 NOD1Q9Y239 953 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 ZNF670-ZNF695F2Z2N8 137 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms