RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SLC25A12O75746 678 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 CDH1P12830 882 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 NME2P22392 152 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 TPP2P29144 1249 aaPredicted RBP15.45■□□□□ 0.06
SSH1-208ENST00000548522 RFC3P40938 356 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 MEF2AQ02078 507 aaPredicted RBP15.45■□□□□ 0.06
SSH1-208ENST00000548522 ACTN3Q08043 901 aaPredicted RBP15.45■□□□□ 0.06
SSH1-208ENST00000548522 DHX34Q14147 1143 aaKnown RBP15.45■□□□□ 0.06
SSH1-208ENST00000548522 MAPKAPK3Q16644 382 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 MEX3BQ6ZN04 569 aaKnown RBP15.45■□□□□ 0.06
SSH1-208ENST00000548522 PCGF5Q86SE9 256 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 GHDCQ8N2G8 530 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 AGGF1Q8N302 714 aaeCLIP15.45■□□□□ 0.06
SSH1-208ENST00000548522 RASGEF1CQ8N431 466 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 EIF1ADQ8N9N8 165 aaKnown RBP15.45■□□□□ 0.06
SSH1-208ENST00000548522 CAMKVQ8NCB2 501 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 ALKBH8Q96BT7 664 aaKnown RBP15.45■□□□□ 0.06
SSH1-208ENST00000548522 SDCCAG3Q96C92 435 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 SPOCK3Q9BQ16 436 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 ENKD1Q9H0I2 346 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 ATG10Q9H0Y0 220 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 ZNF446Q9NWS9 450 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 PPT2Q9UMR5 302 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 DHRS7Q9Y394 339 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 NEU2Q9Y3R4 380 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 SPG11Q96JI7 2443 aa15.45■□□□□ 0.06
SSH1-208ENST00000548522 ZCWPW2A0A1B0GU75 182 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 MAGEB17A8MXT2 336 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 MLYCDO95822 493 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 FGGP02679 453 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 ENO3P13929 434 aaPredicted RBP15.44■□□□□ 0.06
SSH1-208ENST00000548522 PAMP19021 973 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 OR4D2P58180 307 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 CDK16Q00536 496 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 TIAL1Q01085 375 aaKnown RBP eCLIP15.44■□□□□ 0.06
SSH1-208ENST00000548522 CAPN13Q6MZZ7 669 aaPredicted RBP15.44■□□□□ 0.06
SSH1-208ENST00000548522 MARVELD2Q8N4S9 558 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 ZNF740Q8NDX6 193 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 PLPP5Q8NEB5 264 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 ELP5Q8TE02 316 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 PHF10Q8WUB8 498 aaKnown RBP15.44■□□□□ 0.06
SSH1-208ENST00000548522 CHTF18Q8WVB6 975 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 SLC13A3Q8WWT9 602 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.44■□□□□ 0.061e-6■■■■■ 56.2
SSH1-208ENST00000548522 NDNQ99608 321 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 MCCC2Q9HCC0 563 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 KLHL42Q9P2K6 505 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 PDE10AQ9Y233 779 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 VPS9D1Q9Y2B5 631 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 HRH3Q9Y5N1 445 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 SCN3AQ9NY46 2000 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 MED13LQ71F56 2210 aa15.44■□□□□ 0.06
SSH1-208ENST00000548522 E9PLN8 166 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 GOLGA8MH3BSY2 632 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 CCDC188H7C350 402 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 NDUFS4O43181 175 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 TSPAN12O95859 305 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 FHP07954 510 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 NR0B1P51843 470 aaKnown RBP15.43■□□□□ 0.06
SSH1-208ENST00000548522 ITGA8P53708 1063 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 TAS2R50P59544 299 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 GPS1Q13098 491 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 NAE1Q13564 534 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 THOC5Q13769 683 aaKnown RBP15.43■□□□□ 0.06
SSH1-208ENST00000548522 PHKG1Q16816 387 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 DEFB134Q4QY38 66 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 BEND6Q5SZJ8 279 aaPredicted RBP15.43■□□□□ 0.06
SSH1-208ENST00000548522 AGTRAPQ6RW13 159 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 C4orf22Q6V702 233 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 SPNS3Q6ZMD2 512 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 C17orf64Q86WR6 236 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 RPS19BP1Q86WX3 136 aaKnown RBP15.43■□□□□ 0.06
SSH1-208ENST00000548522 AFAP1L2Q8N4X5 818 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 FAM98AQ8NCA5 519 aaKnown RBP15.43■□□□□ 0.06
SSH1-208ENST00000548522 THAP11Q96EK4 314 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 CAPZA3Q96KX2 299 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 OR1F2PQ96R84 312 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 NAP1L3Q99457 506 aaPredicted RBP15.43■□□□□ 0.06
SSH1-208ENST00000548522 TREX2Q9BQ50 279 aaPredicted RBP15.43■□□□□ 0.06
SSH1-208ENST00000548522 VKORC1Q9BQB6 163 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 CCDC68Q9H2F9 335 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 VIPAS39Q9H9C1 493 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 NPDC1Q9NQX5 325 aaPredicted RBP15.43■□□□□ 0.06
SSH1-208ENST00000548522 SLC22A7Q9Y694 548 aa15.43■□□□□ 0.06
SSH1-208ENST00000548522 FAM237BA0A1B0GVD1 139 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 GALR3O60755 368 aaPredicted RBP15.42■□□□□ 0.06
SSH1-208ENST00000548522 B4GALT2O60909 372 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 HAUS5O94927 633 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 SLC35G6P0C7Q6 338 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 HRH2P25021 359 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 MAGEA6P43360 314 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 BTG2P78543 158 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 CD163Q86VB7 1156 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 CYP4X1Q8N118 509 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 LGI4Q8N135 537 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 RPRMLQ8N4K4 120 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 HORMAD2Q8N7B1 307 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 MFSD9Q8NBP5 474 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 CA5BP1Q8WTZ4 195 aa15.42■□□□□ 0.06
SSH1-208ENST00000548522 EEF1AKMT1Q8WVE0 214 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms