RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 BAG5Q9UL15 447 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 SAMHD1Q9Y3Z3 626 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 REV3LO60673 3130 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 A0A1W2PPW3 197 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 KLK1P06870 262 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 MAPK10P53779 464 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 ITGA1P56199 1179 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 C2orf80Q0P641 193 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 PDE7AQ13946 482 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 FGD3Q5JSP0 725 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 PRAMEF14Q5SWL7 426 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 PRAMEF13Q5VWM6 474 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 GTF2IRD2BQ6EKJ0 949 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 UNC5DQ6UXZ4 953 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 GTF2IRD2Q86UP8 949 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 METTL4Q8N3J2 472 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 SUSD6Q92537 303 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 MYOCQ99972 504 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 TRIT1Q9H3H1 467 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 PRSS16Q9NQE7 514 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 BLOC1S6Q9UL45 172 aa17.78■□□□□ 0.44
PRPF40B-208ENST00000548436 PI15O43692 258 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 EPHX1P07099 455 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 ETFAP13804 333 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 OPRD1P41143 372 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 CRATP43155 626 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 EMP3P54852 163 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 TAS2R50P59544 299 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 IL5RAQ01344 420 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 TOP3AQ13472 1001 aaPredicted RBP17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 GPM6BQ13491 265 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 FAM71E1Q6IPT2 247 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 ANGPTL8Q6UXH0 198 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 PDZD3Q86UT5 571 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 BPIFB6Q8NFQ5 453 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 SETD7Q8WTS6 366 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 ACAT2Q9BWD1 397 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 LGR4Q9BXB1 951 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 TM7SF3Q9NS93 570 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 AASSQ9UDR5 926 aa17.77■□□□□ 0.44
PRPF40B-208ENST00000548436 PTGES3LE9PB15 166 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 SUV39H1O43463 412 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 UGT2B11O75310 529 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 CA3P07451 260 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 PIK3CBP42338 1070 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 LRRC74AQ0VAA2 488 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 PIP5KL1Q5T9C9 394 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 FAM109BQ6ICB4 259 aaPredicted RBP17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 HEATR4Q86WZ0 1026 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 C11orf65Q8NCR3 313 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 RAD51AP1Q96B01 352 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 PPCDCQ96CD2 204 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 NRBF2Q96F24 287 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 SLC35A5Q9BS91 424 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 SORBS1Q9BX66 1292 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 HDAC8Q9BY41 377 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 REEP1Q9H902 201 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 MYNNQ9NPC7 610 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 ATAD3AQ9NVI7 634 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 THUMPD1Q9NXG2 353 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 TMEM9Q9P0T7 183 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 TDRKHQ9Y2W6 561 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 C1QTNF3-AMACRE9PGA6 284 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 XPNPEP2O43895 674 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 GPR37L1O60883 481 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 TNFRSF21O75509 655 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 PCCBP05166 539 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 CD247P20963 164 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 FSHRP23945 695 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 FCARP24071 287 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 EPHA2P29317 976 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 DCTN2Q13561 401 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 TUBA3CQ13748 450 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 LAIR1Q6GTX8 287 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 PNCKQ6P2M8 343 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 LCTLQ6UWM7 567 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 TMIGD1Q6UXZ0 262 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 ADAMTSL4Q6UY14 1074 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 GET4Q7L5D6 327 aaPredicted RBP17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 TSEN54Q7Z6J9 526 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 AMZ2Q86W34 360 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 FAM129CQ86XR2 697 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 CACUL1Q86Y37 369 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 MMP21Q8N119 569 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 ADPRHL2Q9NX46 363 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 SPASTQ9UBP0 616 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 ACSL6Q9UKU0 697 aa17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 CFAP20Q9Y6A4 193 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-208ENST00000548436 IGLON5A6NGN9 336 aa17.75■□□□□ 0.43
PRPF40B-208ENST00000548436 FOXD2O60548 495 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-208ENST00000548436 JRKO75564 520 aa17.75■□□□□ 0.43
PRPF40B-208ENST00000548436 KELP23276 732 aa17.75■□□□□ 0.43
PRPF40B-208ENST00000548436 PLA2G16P53816 162 aa17.75■□□□□ 0.43
PRPF40B-208ENST00000548436 TMBIM6P55061 237 aa17.75■□□□□ 0.43
PRPF40B-208ENST00000548436 KEAP1Q14145 624 aa17.75■□□□□ 0.43
PRPF40B-208ENST00000548436 TANGO2Q6ICL3 276 aa17.75■□□□□ 0.43
PRPF40B-208ENST00000548436 UBE2Q1Q7Z7E8 422 aa17.75■□□□□ 0.43
PRPF40B-208ENST00000548436 TFGQ92734 400 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-208ENST00000548436 ZNF566Q969W8 418 aa17.75■□□□□ 0.43
PRPF40B-208ENST00000548436 DOHHQ9BU89 302 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms