RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 C16orf58Q96GQ5 468 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 NECTIN4Q96NY8 510 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 TSSK2Q96PF2 358 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 PUS3Q9BZE2 481 aaKnown RBP3.95□□□□□ -1.78
SCAF11-210ENST00000547654 NACAP1Q9BZK3 213 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 POLR1EQ9GZS1 481 aaKnown RBP3.95□□□□□ -1.78
SCAF11-210ENST00000547654 MIS12Q9H081 205 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 RAB6CQ9H0N0 254 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 SIRPDQ9H106 197 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 ROPN1Q9HAT0 212 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-210ENST00000547654 VAT1LQ9HCJ6 419 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 PANK4Q9NVE7 773 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 NMRK1Q9NWW6 199 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 RAI14Q9P0K7 980 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 IL36RNQ9UBH0 155 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 FAM153AQ9UHL3 310 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 ATP6V1HQ9UI12 483 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 MGAT4BQ9UQ53 548 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 MRPS7Q9Y2R9 242 aaKnown RBP3.95□□□□□ -1.78
SCAF11-210ENST00000547654 AMDHD2Q9Y303 409 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 PCDHGB1Q9Y5G3 927 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 EFCAB5A4FU69 1503 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 UTRNP46939 3433 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 PCDH11YQ9BZA8 1340 aa3.95□□□□□ -1.78
SCAF11-210ENST00000547654 ABCA8O94911 1581 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 KDM5CP41229 1560 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 PLA2R1Q13018 1463 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 OR5K3A6NET4 321 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 ANKDD1BA6NHY2 528 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 NPIPA3F8WFD2 350 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 MAPK13O15264 365 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 TLX2O43763 284 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-210ENST00000547654 KLHL41O60662 606 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 CYP1A2P05177 515 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 SFTPBP07988 381 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 KRT19P08727 400 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 TNNI3P19429 210 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 FUT1P19526 365 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 PRDX6P30041 224 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 HLA-FP30511 346 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 NUMBP49757 651 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 CLDN15P56746 228 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 DSCR9P59020 149 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 RPS18P62269 152 aaKnown RBP3.94□□□□□ -1.78
SCAF11-210ENST00000547654 CX3CL1P78423 397 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 HSF2Q03933 536 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 KLC1Q07866 573 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 ABRQ12979 859 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 PRKAA1Q13131 559 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 GPS2Q13227 327 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 SNX1Q13596 522 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 CA9Q16790 459 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 USH1GQ495M9 461 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 GLIPR1L2Q4G1C9 344 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 FILIP1LQ4L180 1135 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 TMEM35AQ53FP2 167 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 TMEM41BQ5BJD5 291 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 PAPPA-AS1Q5QFB9 102 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 FAM69BQ5VUD6 431 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 ARHGEF16Q5VV41 709 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 SUSD4Q5VX71 490 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 LYSMD4Q5XG99 296 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 SULT1C3Q6IMI6 304 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 TTC27Q6P3X3 843 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 CCNI2Q6ZMN8 369 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-210ENST00000547654 ZNF704Q6ZNC4 412 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-210ENST00000547654 Q6ZSV7 163 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 Q75L30 129 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 ZNF367Q7RTV3 350 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 GPR141Q7Z602 305 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 VASH2Q86V25 355 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 NUDT13Q86X67 352 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 MMD2Q8IY49 270 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 CENPLQ8N0S6 344 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-210ENST00000547654 SMYD1Q8NB12 490 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 FAM71CQ8NEG0 241 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 C7orf57Q8NEG2 295 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 DQX1Q8TE96 717 aaKnown RBP3.94□□□□□ -1.78
SCAF11-210ENST00000547654 SLC20A1Q8WUM9 679 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 HAS2Q92819 552 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 PHF21AQ96BD5 680 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 TTC25Q96NG3 672 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 FTHL17Q9BXU8 183 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 SPRY4Q9C004 299 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 RAB33BQ9H082 229 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 TMEM117Q9H0C3 514 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 DCLRE1BQ9H816 532 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 RMND5AQ9H871 391 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 Q9H8V8 135 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 RNF121Q9H920 327 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 ACTR8Q9H981 624 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 ACKR4Q9NPB9 350 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 NOX4Q9NPH5 578 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 SPHK1Q9NYA1 384 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 KLHL9Q9P2J3 617 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 COPS7AQ9UBW8 275 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 ENTPD4Q9Y227 616 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 KLK4Q9Y5K2 254 aa3.94□□□□□ -1.78
SCAF11-210ENST00000547654 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.94□□□□□ -1.78
SCAF11-210ENST00000547654 PTPRKQ15262 1439 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms