RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ERVK-21P61565 698 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 TXNL4AP83876 142 aaKnown RBP12.2□□□□□ -0.46
SCAF11-209ENST00000547018 MAP7Q14244 749 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 ZNF750Q32MQ0 723 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 RPS26P11Q5JNZ5 115 aaPredicted RBP12.2□□□□□ -0.46
SCAF11-209ENST00000547018 GPR153Q6NV75 609 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 KCTD8Q6ZWB6 473 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 ADHFE1Q8IWW8 467 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 TMIEQ8NEW7 156 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 TNIP2Q8NFZ5 429 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 RHNO1Q9BSD3 238 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 EQTNQ9NQ60 294 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 PCDHGA8Q9Y5G5 932 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 ABCA7Q8IZY2 2146 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 LRRK1Q38SD2 2015 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 NARSO43776 548 aaKnown RBP12.2□□□□□ -0.46
SCAF11-209ENST00000547018 KLF8O95600 359 aaPredicted RBP12.2□□□□□ -0.46
SCAF11-209ENST00000547018 C9P02748 559 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 ASGR2P07307 311 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 HOXB2P14652 356 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 IDSP22304 550 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 GPC1P35052 558 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 MANFP55145 182 aaKnown RBP12.2□□□□□ -0.46
SCAF11-209ENST00000547018 ABHD18Q0P651 414 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 SMN1Q16637 294 aaKnown RBP12.2□□□□□ -0.46
SCAF11-209ENST00000547018 CYP2A13Q16696 494 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 SLC36A3Q495N2 470 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 INTS11Q5TA45 600 aaKnown RBP12.2□□□□□ -0.46
SCAF11-209ENST00000547018 ENPP7Q6UWV6 458 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 WDR53Q7Z5U6 358 aaPredicted RBP12.2□□□□□ -0.46
SCAF11-209ENST00000547018 TMEM126BQ8IUX1 230 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 ARL10Q8N8L6 244 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 VANGL1Q8TAA9 524 aaPredicted RBP12.2□□□□□ -0.46
SCAF11-209ENST00000547018 VPS35Q96QK1 796 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 INSM2Q96T92 566 aaPredicted RBP12.2□□□□□ -0.46
SCAF11-209ENST00000547018 DMRT3Q9NQL9 472 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 FBXW2Q9UKT8 454 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 PLXND1Q9Y4D7 1925 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 J3KTA2 159 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 UPK1AO00322 258 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 LCMT2O60294 686 aaKnown RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 PRSS23O95084 383 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 NPPAP01160 153 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 EIF2S1P05198 315 aaKnown RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 FCARP24071 287 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 IDH2P48735 452 aaKnown RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 PMS2P3Q13401 168 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 CCDC85BQ15834 202 aaPredicted RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 SLC5A12Q1EHB4 618 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 PRSS53Q2L4Q9 553 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 AGBL4Q5VU57 503 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 ANKRD54Q6NXT1 300 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 SFTPA2Q8IWL1 248 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 RIMKLAQ8IXN7 391 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 OR2L2Q8NH16 312 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 SLC6A16Q9GZN6 736 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 RHBGQ9H310 441 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 ZNF696Q9H7X3 374 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 FANCEQ9HB96 536 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 LTBP2Q14767 1821 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 A0A1W2PRB8 838 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 PI15O43692 258 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 LILRB5O75023 590 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 PTPN6P29350 595 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 ALDH3A2P51648 485 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 ARHGDIAP52565 204 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 ZNF763Q0D2J5 394 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 EIF4HQ15056 248 aaKnown RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 SDE2Q6IQ49 451 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 R3HCC1LQ7Z5L2 792 aaKnown RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 GPR149Q86SP6 731 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 NRSN1Q8IZ57 195 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 DNAJC5GQ8N7S2 189 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 UTP15Q8TED0 518 aaKnown RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 C16orf78Q8WTQ4 265 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 HMGB4Q8WW32 186 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 AMBRA1Q9C0C7 1298 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 SPATA6Q9NWH7 488 aaPredicted RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 THAP10Q9P2Z0 257 aaPredicted RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 PAPLNO95428 1278 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 ALPLP05186 524 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 LAMP2P13473 410 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 IGFBP5P24593 272 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 PPP2CBP62714 309 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 PPP2CAP67775 309 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 HYAL1Q12794 435 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 ATG9BQ674R7 924 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 NUDT18Q6ZVK8 323 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 TRIM73Q86UV7 250 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 MEX3DQ86XN8 651 aaKnown RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 PLPP6Q8IY26 295 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 C8orf59Q8N0T1 100 aaPredicted RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 NLGN4XQ8N0W4 816 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 XAGE5Q8WWM1 108 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 KCNC2Q96PR1 638 aa12.19□□□□□ -0.46
SCAF11-209ENST00000547018 ZFR2Q9UPR6 939 aaKnown RBP12.19□□□□□ -0.46
SCAF11-209ENST00000547018 MUC3AQ02505 3323 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 CCDC85CA6NKD9 419 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 FAM227AF5H4B4 570 aa12.18□□□□□ -0.46
SCAF11-209ENST00000547018 EIF3FO00303 357 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms