RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 VN1R5Q7Z5H4 357 aa15.95■□□□□ 0.14
CCDC38-203ENST00000546803 MILR1Q7Z6M3 343 aa15.95■□□□□ 0.14
CCDC38-203ENST00000546803 AMER3Q8N944 861 aa15.95■□□□□ 0.14
CCDC38-203ENST00000546803 OR52B6Q8NGF0 335 aa15.95■□□□□ 0.14
CCDC38-203ENST00000546803 UTP15Q8TED0 518 aaKnown RBP15.95■□□□□ 0.14
CCDC38-203ENST00000546803 ZNF473Q8WTR7 871 aaKnown RBP15.95■□□□□ 0.14
CCDC38-203ENST00000546803 GAL3ST3Q96A11 431 aa15.95■□□□□ 0.14
CCDC38-203ENST00000546803 SMIM10Q96HG1 83 aa15.95■□□□□ 0.14
CCDC38-203ENST00000546803 CENPHQ9H3R5 247 aa15.95■□□□□ 0.14
CCDC38-203ENST00000546803 SSU72Q9NP77 194 aaKnown RBP15.95■□□□□ 0.14
CCDC38-203ENST00000546803 MKKSQ9NPJ1 570 aaPredicted RBP15.95■□□□□ 0.14
CCDC38-203ENST00000546803 SEMA4BQ9NPR2 832 aaPredicted RBP15.95■□□□□ 0.14
CCDC38-203ENST00000546803 TRPC4Q9UBN4 977 aa15.95■□□□□ 0.14
CCDC38-203ENST00000546803 RNF11Q9Y3C5 154 aa15.95■□□□□ 0.14
CCDC38-203ENST00000546803 PTRH2Q9Y3E5 179 aaKnown RBP15.95■□□□□ 0.14
CCDC38-203ENST00000546803 ACTL7BQ9Y614 415 aa15.95■□□□□ 0.14
CCDC38-203ENST00000546803 FRYQ5TBA9 3013 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 SNRNP200O75643 2136 aaKnown RBP15.94■□□□□ 0.14
CCDC38-203ENST00000546803 GALR3O60755 368 aaPredicted RBP15.94■□□□□ 0.14
CCDC38-203ENST00000546803 CNOT3O75175 753 aaKnown RBP15.94■□□□□ 0.14
CCDC38-203ENST00000546803 ZNF888P0CJ79 500 aaPredicted RBP15.94■□□□□ 0.14
CCDC38-203ENST00000546803 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 PCNAP12004 261 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 FOLR3P41439 243 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 TGM3Q08188 693 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 TRAF3Q13114 568 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 ERV3-1Q14264 604 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 CASP8Q14790 479 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 RBBP7Q16576 425 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 CPSF6Q16630 551 aaKnown RBP eCLIP15.94■□□□□ 0.14
CCDC38-203ENST00000546803 ADPRMQ3LIE5 342 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 TMEM35AQ53FP2 167 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 PRSS41Q7RTY9 318 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 SRFBP1Q8NEF9 429 aaKnown RBP15.94■□□□□ 0.14
CCDC38-203ENST00000546803 ARMC2Q8NEN0 867 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 STT3BQ8TCJ2 826 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 TRPC4APQ8TEL6 797 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 THAP4Q8WY91 577 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 NACC2Q96BF6 587 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 MS4A6EQ96DS6 147 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 CRELD1Q96HD1 420 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 ZNF382Q96SR6 550 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 TGIF2Q9GZN2 237 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 REXO4Q9GZR2 422 aaKnown RBP15.94■□□□□ 0.14
CCDC38-203ENST00000546803 C12orf65Q9H3J6 166 aaKnown RBP15.94■□□□□ 0.14
CCDC38-203ENST00000546803 KLHL31Q9H511 634 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 C14orf105Q9NVL8 296 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 OXSMQ9NWU1 459 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 CTSFQ9UBX1 484 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 NAALAD2Q9Y3Q0 740 aa15.94■□□□□ 0.14
CCDC38-203ENST00000546803 FREM2Q5SZK8 3169 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 A0A088AWK7 358 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 GOLGA6L10A6NI86 522 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 H3BQF6 201 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 SGK494L7N484 410 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 TYROBPO43914 113 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 SPAG7O75391 227 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 TBX6O95947 436 aaPredicted RBP15.93■□□□□ 0.14
CCDC38-203ENST00000546803 ITGB2P05107 769 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 PRKAR1AP10644 381 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 ZNF10P21506 573 aaPredicted RBP15.93■□□□□ 0.14
CCDC38-203ENST00000546803 IL10P22301 178 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 HNRNPH1P31943 449 aaKnown RBP15.93■□□□□ 0.14
CCDC38-203ENST00000546803 SNRPNP63162 240 aaKnown RBP15.93■□□□□ 0.14
CCDC38-203ENST00000546803 ASPHQ12797 758 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 ZRSR2Q15696 482 aaKnown RBP15.93■□□□□ 0.14
CCDC38-203ENST00000546803 DEFB134Q4QY38 66 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 LIPMQ5VYY2 423 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 TRIM40Q6P9F5 258 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 CHSY3Q70JA7 882 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 RPS27LQ71UM5 84 aaKnown RBP15.93■□□□□ 0.14
CCDC38-203ENST00000546803 EXOC3L1Q86VI1 746 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 PDSS2Q86YH6 399 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 RAB43Q86YS6 212 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 OR2L5Q8NG80 312 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 OR4F6Q8NGB9 312 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 HUS1BQ8NHY5 278 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 TCP10LQ8TDR4 215 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 MIEF2Q96C03 454 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 CMTM7Q96FZ5 175 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 FAR2Q96K12 515 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 IP6K3Q96PC2 410 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 FAM111AQ96PZ2 611 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 CDK15Q96Q40 435 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 SPSB2Q99619 263 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 YIPF2Q9BWQ6 316 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 MS4A8Q9BY19 250 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 PRM3Q9NNZ6 103 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 PSD3Q9NYI0 1048 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 POLHQ9Y253 713 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 PCM1Q15154 2024 aa15.93■□□□□ 0.14
CCDC38-203ENST00000546803 CDC14CA4D256 554 aa15.92■□□□□ 0.14
CCDC38-203ENST00000546803 FOXE1O00358 373 aaPredicted RBP15.92■□□□□ 0.14
CCDC38-203ENST00000546803 ERI3O43414 337 aaKnown RBP15.92■□□□□ 0.14
CCDC38-203ENST00000546803 TRIM13O60858 407 aa15.92■□□□□ 0.14
CCDC38-203ENST00000546803 IGHEP01854 428 aa15.92■□□□□ 0.14
CCDC38-203ENST00000546803 ZGLP1P0C6A0 271 aa15.92■□□□□ 0.14
CCDC38-203ENST00000546803 H2AFXP16104 143 aaPredicted RBP15.92■□□□□ 0.14
CCDC38-203ENST00000546803 CREB1P16220 341 aa15.92■□□□□ 0.14
CCDC38-203ENST00000546803 NAGLUP54802 743 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms