RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 E7EVH7 732 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 NPIPA2E9PIF3 369 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 NPIPA3F8WFD2 350 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 FCHO1O14526 889 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 CBFA2T2O43439 604 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 DNAJB6O75190 326 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 SYF2O95926 243 aaKnown RBP11.9□□□□□ -0.5
SCAF11-208ENST00000546534 FHP07954 510 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 IL10P22301 178 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 NMBRP28336 390 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 FDFT1P37268 417 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 COILP38432 576 aaPredicted RBP11.9□□□□□ -0.5
SCAF11-208ENST00000546534 CRADDP78560 199 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 KLF1Q13351 362 aaPredicted RBP11.9□□□□□ -0.5
SCAF11-208ENST00000546534 TYSND1Q2T9J0 566 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 SKOR2Q2VWA4 1001 aaPredicted RBP11.9□□□□□ -0.5
SCAF11-208ENST00000546534 ARSKQ6UWY0 536 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 TAOK1Q7L7X3 1001 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 SLC26A11Q86WA9 606 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 CDC20BQ86Y33 519 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 LIX1LQ8IVB5 337 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 REXO1L1PQ8IX06 675 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 ARMC10Q8N2F6 343 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 OTUD6BQ8N6M0 293 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 CAMKVQ8NCB2 501 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 NFAM1Q8NET5 270 aaPredicted RBP11.9□□□□□ -0.5
SCAF11-208ENST00000546534 WFDC11Q8NEX6 87 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 LPGAT1Q92604 370 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 MDFIQ99750 246 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 TTYH2Q9BSA4 534 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 DEFB126Q9BYW3 111 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 SLC22A7Q9Y694 548 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 DUSP10Q9Y6W6 482 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 AKR1B15C9JRZ8 316 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-208ENST00000546534 H3BMM5 538 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 LCMT2O60294 686 aaKnown RBP11.89□□□□□ -0.51
SCAF11-208ENST00000546534 ESR1P03372 595 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 HRH2P25021 359 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 ACVR2AP27037 513 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 ARNTP27540 789 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 ZFP36L2P47974 494 aaKnown RBP11.89□□□□□ -0.51
SCAF11-208ENST00000546534 SESN2P58004 480 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-208ENST00000546534 C4orf48Q5BLP8 95 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 PAOXQ6QHF9 649 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 PRUNE1Q86TP1 453 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 ASPGQ86U10 573 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 CNGA4Q8IV77 575 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 CYP4Z2PQ8N1L4 340 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 FBXO15Q8NCQ5 510 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-208ENST00000546534 GOT1L1Q8NHS2 421 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-208ENST00000546534 SLC13A3Q8WWT9 602 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 ASB11Q8WXH4 323 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 ATG4AQ8WYN0 398 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 TBC1D20Q96BZ9 403 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 MBD6Q96DN6 1003 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 SLC30A3Q99726 388 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 RAB6BQ9NRW1 208 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 DEPPQ9NTK1 212 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 EDARQ9UNE0 448 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 SH2B3Q9UQQ2 575 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 CRYL1Q9Y2S2 319 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 FAM215AQ9Y5M1 114 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 SCN3AQ9NY46 2000 aa11.89□□□□□ -0.51
SCAF11-208ENST00000546534 A0A0G2JNJ9 132 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 PINLYPA6NC86 204 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 SAGE2PA6NJ88 616 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 FAM166BA8MTA8 275 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 A8MUA0 341 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 GOLGA8KD6RF30 607 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 GOLGA8TH3BQL2 631 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 CHST10O43529 356 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 B4GALT2O60909 372 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 VAPBO95292 243 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 B3GALT4O96024 378 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 IFNB1P01574 187 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 APRTP07741 180 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 GLI4P10075 376 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 IMPA1P29218 277 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 STIP1P31948 543 aaKnown RBP11.88□□□□□ -0.51
SCAF11-208ENST00000546534 KIR2DL3P43628 341 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 PPIAP62937 165 aaKnown RBP11.88□□□□□ -0.51
SCAF11-208ENST00000546534 BTG2P78543 158 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 SPA17Q15506 151 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 TMEM198Q66K66 360 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 CAPN13Q6MZZ7 669 aaPredicted RBP11.88□□□□□ -0.51
SCAF11-208ENST00000546534 ZNF585AQ6P3V2 769 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 CAMKMTQ7Z624 323 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 SDCCAG8Q86SQ7 713 aaPredicted RBP11.88□□□□□ -0.51
SCAF11-208ENST00000546534 TMEM156Q8N614 296 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 C18orf12Q96KH6 178 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 PTCHD1Q96NR3 888 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 PANX2Q96RD6 677 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 CRIM1Q9NZV1 1036 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 Q9UFV3 132 aa11.88□□□□□ -0.51
SCAF11-208ENST00000546534 PHF3Q92576 2039 aaKnown RBP11.87□□□□□ -0.51
SCAF11-208ENST00000546534 KIAA1324LA8MWY0 1029 aaPredicted RBP11.87□□□□□ -0.51
SCAF11-208ENST00000546534 E5RI56 91 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 GFYI3L273 518 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 GALR3O60755 368 aaPredicted RBP11.87□□□□□ -0.51
SCAF11-208ENST00000546534 ITGA10O75578 1167 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms