RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SLC44A2Q8IWA5 706 aaPredicted RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 KLHDC8AQ8IYD2 350 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 NLGN4XQ8N0W4 816 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 CYP4Z2PQ8N1L4 340 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 CELF2-AS1Q8N7Q2 184 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 GPR26Q8NDV2 337 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 GOT1L1Q8NHS2 421 aaPredicted RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 GEMIN6Q8WXD5 167 aaKnown RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 MGLLQ99685 303 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 ASAH2Q9NR71 780 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 BTBD3Q9Y2F9 522 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 ZNF451Q9Y4E5 1061 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 NOX1Q9Y5S8 564 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 CFAP20Q9Y6A4 193 aaKnown RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 GLTPD2A6NH11 291 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 H3BQ06 376 aaPredicted RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 GCM2O75603 506 aaPredicted RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 HLA-EP13747 358 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 LIMS1P48059 325 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 SLC11A1P49279 550 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 HMGA2P52926 109 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 PFN3P60673 137 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 RHAGQ02094 409 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 EXOC3L2Q2M3D2 409 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 SOWAHCQ53LP3 525 aaPredicted RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 SPIN4Q56A73 249 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 ATAD3CQ5T2N8 411 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 C6orf183Q5T699 404 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 SLC8B1Q6J4K2 584 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 FAM92BQ6ZTR7 304 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 TPRG1Q6ZUI0 275 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 TRIM69Q86WT6 500 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 TRMT2BQ96GJ1 504 aaKnown RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 WDFY2Q96P53 400 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 OR2A14Q96R47 310 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 BHLHE41Q9C0J9 482 aaPredicted RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 TMEM38AQ9H6F2 299 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 RNF167Q9H6Y7 350 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 AMBNQ9NP70 447 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 TMEM184CQ9NVA4 438 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 CLN6Q9NWW5 311 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 MS4A12Q9NXJ0 267 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 TBC1D24Q9ULP9 559 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 CAB39Q9Y376 341 aaPredicted RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 HCN4Q9Y3Q4 1203 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 COL4A6Q14031 1691 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 MTCL1Q9Y4B5 1905 aaKnown RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 CXorf51AA0A1B0GTR3 108 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 SLC35F4A4IF30 521 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 NPIPB15A6NHN6 443 aaPredicted RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 ZAR1LA6NP61 321 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 GABRR3A8MPY1 467 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 SCO2O43819 266 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 TNFRSF21O75509 655 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 CCNB2O95067 398 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 IFNA14P01570 189 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 CD22P20273 847 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 CBLP22681 906 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 ITPKAP23677 461 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 CHMP24386 653 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 XCR1P46094 333 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 RPS5P46782 204 aaKnown RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 PRIM2P49643 509 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 PNLIPRP1P54315 467 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 CDH12P55289 794 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 TSTQ16762 297 aaKnown RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 GCNT6Q5T4J0 391 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 PLAG1Q6DJT9 500 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 USP45Q70EL2 814 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 SLC30A8Q8IWU4 369 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 C1orf52Q8N6N3 182 aaKnown RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 PCSK9Q8NBP7 692 aaKnown RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 OR6K2Q8NGY2 324 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 UTP15Q8TED0 518 aaKnown RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 SKA2Q8WVK7 121 aaPredicted RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 WBP2Q969T9 261 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 PIP5K1AQ99755 562 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 P2RY13Q9BPV8 354 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 NIPSNAP1Q9BPW8 284 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 TMEM175Q9BSA9 504 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 NMRK2Q9NPI5 230 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 TRPV5Q9NQA5 729 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 RLIMQ9NVW2 624 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 FTSJ1Q9UET6 329 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 PPIL1Q9Y3C6 166 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 N6AMT1Q9Y5N5 214 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 NUP210Q8TEM1 1887 aaPredicted RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 ANKRD34BA5PLL1 514 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 MANSC4A6NHS7 340 aaPredicted RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 K7ERQ8 282 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 ARHGAP33O14559 1287 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 SCG5P05408 212 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 GSTM1P09488 218 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 HSMCR30P0CW71 290 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 IDSP22304 550 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 AQP1P29972 269 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 MVDP53602 400 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 RAE1P78406 368 aaKnown RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 HSPA14Q0VDF9 509 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 DMC1Q14565 340 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms