RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 SCN3AQ9NY46 2000 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 CCDC88CQ9P219 2028 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 H0YIV9 168 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 K7ENP7 123 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 FFAR3O14843 346 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 GPR42O15529 346 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 KLHL18O94889 574 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 NSA2O95478 260 aaKnown RBP14.32□□□□□ -0.12
CD9-210ENST00000543916 OTCP00480 354 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 PIM1P11309 404 aaPredicted RBP14.32□□□□□ -0.12
CD9-210ENST00000543916 FBLP22087 321 aaKnown RBP14.32□□□□□ -0.12
CD9-210ENST00000543916 ETV4P43268 484 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 NAGLUP54802 743 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 DNAJB13P59910 316 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 RAB8AP61006 207 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 RPS15P62841 145 aaKnown RBP14.32□□□□□ -0.12
CD9-210ENST00000543916 CXADRP78310 365 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 VAC14Q08AM6 782 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 DSG2Q14126 1118 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 ZRSR2Q15696 482 aaKnown RBP14.32□□□□□ -0.12
CD9-210ENST00000543916 CPSF6Q16630 551 aaKnown RBP eCLIP14.32□□□□□ -0.12
CD9-210ENST00000543916 SYT16Q17RD7 645 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 ADPRMQ3LIE5 342 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 LIPMQ5VYY2 423 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 LETMD1Q6P1Q0 360 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 INO80CQ6PI98 192 aaPredicted RBP14.32□□□□□ -0.12
CD9-210ENST00000543916 OVCH1Q7RTY7 1134 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 C10orf107Q8IVU9 208 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 ZNF473Q8WTR7 871 aaKnown RBP14.32□□□□□ -0.12
CD9-210ENST00000543916 UBE2E3Q969T4 207 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 COL26A1Q96A83 441 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 FKBP10Q96AY3 582 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 MS4A6EQ96DS6 147 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 SEC16BQ96JE7 1060 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 C17orf62Q9BQA9 187 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 MECRQ9BV79 373 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 ANKHQ9HCJ1 492 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 GPN3Q9UHW5 284 aaPredicted RBP14.32□□□□□ -0.12
CD9-210ENST00000543916 TCFL5Q9UL49 500 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 CDC14AQ9UNH5 594 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 NAALAD2Q9Y3Q0 740 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 ACTL7BQ9Y614 415 aa14.32□□□□□ -0.12
CD9-210ENST00000543916 KMT2BQ9UMN6 2715 aaPredicted RBP14.32□□□□□ -0.12
CD9-210ENST00000543916 PCSK5Q92824 1860 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 LRIT2A6NDA9 550 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 ZNF860A6NHJ4 632 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 SGK494L7N484 410 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 GALR3O60755 368 aaPredicted RBP14.31□□□□□ -0.12
CD9-210ENST00000543916 RDH16O75452 317 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 CREG1O75629 220 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 KLF7O75840 302 aaPredicted RBP14.31□□□□□ -0.12
CD9-210ENST00000543916 OR4F21O95013 312 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 SMIM10L1P0DMW3 83 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 ALOX12P18054 663 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 ALDH3A1P30838 453 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 CCR10P46092 362 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 AVPR1BP47901 424 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 STXBP1P61764 594 aaKnown RBP14.31□□□□□ -0.12
CD9-210ENST00000543916 MAT1AQ00266 395 aaKnown RBP14.31□□□□□ -0.12
CD9-210ENST00000543916 IL10RAQ13651 578 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 DDX39BQ13838 428 aaKnown RBP14.31□□□□□ -0.12
CD9-210ENST00000543916 MPP2Q14168 576 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 COL28A1Q2UY09 1125 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 GGTA1PQ4G0N0 100 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 DEFB134Q4QY38 66 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 ATP1A1-AS1Q5TC04 95 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 FRMD7Q6ZUT3 714 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 ABHD13Q7L211 337 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 MILR1Q7Z6M3 343 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 SYVN1Q86TM6 617 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 HUS1BQ8NHY5 278 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 WDR20Q8TBZ3 569 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 GAL3ST3Q96A11 431 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 TLCD1Q96CP7 247 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 SMIM10Q96HG1 83 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 ZNF382Q96SR6 550 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 MTERF1Q99551 399 aaKnown RBP14.31□□□□□ -0.12
CD9-210ENST00000543916 MS4A8Q9BY19 250 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 STMN4Q9H169 189 aaPredicted RBP14.31□□□□□ -0.12
CD9-210ENST00000543916 SLC26A1Q9H2B4 701 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 TRPS1Q9UHF7 1281 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 TSC22D4Q9Y3Q8 395 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 PCDHGA11Q9Y5H2 935 aa14.31□□□□□ -0.12
CD9-210ENST00000543916 TPRP12270 2363 aaKnown RBP14.31□□□□□ -0.12
CD9-210ENST00000543916 A0A0G2JN53 185 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 GOLGA6L10A6NI86 522 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 ZNF891A8MT65 544 aaPredicted RBP14.3□□□□□ -0.12
CD9-210ENST00000543916 H0YIG0 161 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 UBFD1O14562 309 aaKnown RBP14.3□□□□□ -0.12
CD9-210ENST00000543916 NKX2-8O15522 239 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 PRPF4O43172 522 aaKnown RBP eCLIP14.3□□□□□ -0.12
CD9-210ENST00000543916 DNAJB6O75190 326 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 SH3BGRLO75368 114 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 MLYCDO95822 493 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 TGFB1P01137 390 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 ALBP02768 609 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 FURINP09958 794 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 PRKAR1AP10644 381 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 SERPINB1P30740 379 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 LCP2Q13094 533 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms