RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 ASPNQ9BXN1 380 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 TMEM248Q9NWD8 314 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 ZNF282Q9UDV7 671 aaPredicted RBP12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 DHRS7Q9Y394 339 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 PCDHGA10Q9Y5H3 936 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 SLC1A7O00341 560 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 COCHO43405 550 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 NUP62P37198 522 aaPredicted RBP12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 MAN2A2P49641 1150 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 SEC13P55735 322 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 MC1RQ01726 317 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 RTL4Q6ZR62 310 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 RASSF6Q6ZTQ3 369 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 SUN5Q8TC36 379 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 NETO1Q8TDF5 533 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 MRPL48Q96GC5 212 aaKnown RBP12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 SLC35G5Q96KT7 338 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 PSKH2Q96QS6 385 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 SLC30A3Q99726 388 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 PSMD9O00233 223 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 ERI3O43414 337 aaKnown RBP12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 MMP20O60882 483 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 POP7O75817 140 aaKnown RBP12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 ETFAP13804 333 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 HNF1BP35680 557 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 RPL6Q02878 288 aaKnown RBP12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 NFATC2Q13469 925 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 RFTN1Q14699 578 aaPredicted RBP12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 GET4Q7L5D6 327 aaPredicted RBP12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 SHFQ7M4L6 423 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 MINDY1Q8N5J2 469 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 GRHL3Q8TE85 626 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 TNFAIP8L1Q8WVP5 186 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 RERGQ96A58 199 aaPredicted RBP12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 MYRFLQ96LU7 910 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 RANBP9Q96S59 729 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 EIF3KQ9UBQ5 218 aaKnown RBP12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 RIMS3Q9UJD0 308 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 PCDHGA8Q9Y5G5 932 aa12.5□□□□□ -0.41
TUBGCP2-210ENST00000543663 MID1O15344 667 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ZNF623O75123 536 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 BCAS1O75363 584 aaPredicted RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 SLC10A3P09131 477 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ALDOCP09972 364 aaKnown RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ATF4P18848 351 aaPredicted RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 CTGFP29279 349 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 NR4A2P43354 598 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ARCN1P48444 511 aaKnown RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 STARP49675 285 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 PSMD4P55036 377 aaKnown RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 FAM91A1Q658Y4 838 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 CYS1Q717R9 158 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ARHGAP12Q8IWW6 846 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 TMCO6Q96DC7 493 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 RTP3Q9BQQ7 232 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 NUMBLQ9Y6R0 609 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 DAPL1A0PJW8 107 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 H7BY64 318 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 SLC9A3R1O14745 358 aaPredicted RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ATP1B2P14415 290 aaPredicted RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ETV3P41162 512 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 RGRP47804 291 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 RUNDC3AQ59EK9 446 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 Q6ZPB1 254 aaPredicted RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 NPAS3Q8IXF0 933 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 RPL3LQ92901 407 aaKnown RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 PRAP1Q96NZ9 151 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ZNF382Q96SR6 550 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 FAM129BQ96TA1 746 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 GINS4Q9BRT9 223 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 SEZ6LQ9BYH1 1024 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 TTYH1Q9H313 450 aaPredicted RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 XKR8Q9H6D3 395 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 NANSQ9NR45 359 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 KCNK6Q9Y257 313 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 FUOMA2VDF0 154 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 RPP14O95059 124 aaKnown RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 RB1P06400 928 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 H1F0P07305 194 aaKnown RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 HOXD8P13378 290 aaPredicted RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ALAS2P22557 587 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ITGA3P26006 1051 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 SNRPD2P62316 118 aaKnown RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 NDUFA5Q16718 116 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ADGRG5Q8IZF4 528 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 LNX2Q8N448 690 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 ZNF675Q8TD23 568 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 GPR151Q8TDV0 419 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 KLHL6Q8WZ60 621 aa12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 NLE1Q9NVX2 485 aaPredicted RBP12.49□□□□□ -0.41
TUBGCP2-210ENST00000543663 KCNC1P48547 511 aa12.48□□□□□ -0.41
TUBGCP2-210ENST00000543663 HNRNPA0Q13151 305 aaKnown RBP12.48□□□□□ -0.41
TUBGCP2-210ENST00000543663 CLCA4Q14CN2 919 aa12.48□□□□□ -0.41
TUBGCP2-210ENST00000543663 VMACQ2NL98 169 aa12.48□□□□□ -0.41
TUBGCP2-210ENST00000543663 SMU1Q2TAY7 513 aa12.48□□□□□ -0.41
TUBGCP2-210ENST00000543663 TBRG1Q3YBR2 411 aa12.48□□□□□ -0.41
TUBGCP2-210ENST00000543663 GPR33Q49SQ1 333 aa12.48□□□□□ -0.41
TUBGCP2-210ENST00000543663 TOR1AIP1Q5JTV8 583 aa12.48□□□□□ -0.41
TUBGCP2-210ENST00000543663 OTUD1Q5VV17 481 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms