RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 TPT1P8Q9HAU6 139 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 TIGARQ9NQ88 270 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 LHX3Q9UBR4 397 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 MAN2B2Q9Y2E5 1009 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 PNMA8CA0A1B0GUJ8 204 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 TMEM229AB2RXF0 380 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 H3BQ06 376 aaPredicted RBP13.68□□□□□ -0.22
PRAME-214ENST00000543184 TNFRSF11BO00300 401 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 LRRTM2O43300 516 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 COCHO43405 550 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 CDK1P06493 297 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 IGFBP1P08833 259 aaPredicted RBP13.68□□□□□ -0.22
PRAME-214ENST00000543184 CXCR2P25025 360 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 HMGCLP35914 325 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 ATP5C1P36542 298 aaKnown RBP13.68□□□□□ -0.22
PRAME-214ENST00000543184 ELP6Q0PNE2 266 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 GAB1Q13480 694 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 DUOXA1Q1HG43 343 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 COX20Q5RI15 118 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 FAHD1Q6P587 224 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 UBE2R2Q712K3 238 aaPredicted RBP13.68□□□□□ -0.22
PRAME-214ENST00000543184 CBLL1Q75N03 491 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 B3GNT7Q8NFL0 401 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 MRPL17Q9NRX2 175 aaKnown RBP13.68□□□□□ -0.22
PRAME-214ENST00000543184 SPASTQ9UBP0 616 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 TRPS1Q9UHF7 1281 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 ACSL6Q9UKU0 697 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 TBC1D24Q9ULP9 559 aa13.68□□□□□ -0.22
PRAME-214ENST00000543184 COLQQ9Y215 455 aaPredicted RBP13.68□□□□□ -0.22
PRAME-214ENST00000543184 C2orf78A6NCI8 922 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 PRAMEF25A6NGN4 478 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 CLCA1A8K7I4 914 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 TMEM189-UBE2V1I3L0A0 370 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 GCM2O75603 506 aaPredicted RBP13.67□□□□□ -0.22
PRAME-214ENST00000543184 SEMG1P04279 462 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 AMD1P17707 334 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 CCR7P32248 378 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 HNF1BP35680 557 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 SOX3P41225 446 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 HKDC1Q2TB90 917 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 EIF3MQ7L2H7 374 aaKnown RBP13.67□□□□□ -0.22
PRAME-214ENST00000543184 ADGRD2Q7Z7M1 963 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 ZSWIM9Q86XI8 627 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 TDHQ8IZJ6 230 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 RBFAQ8N0V3 343 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 STK40Q8N2I9 435 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 CEP19Q96LK0 163 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 IL4I1Q96RQ9 567 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 OLA1Q9NTK5 396 aaKnown RBP13.67□□□□□ -0.22
PRAME-214ENST00000543184 ISPDA4D126 451 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 PCDH17O14917 1159 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 MED26O95402 600 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 ANXA5P08758 320 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 HLA-EP13747 358 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 SLC11A2P49281 568 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 ITGA1P56199 1179 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 SPIBQ01892 262 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 BAK1Q16611 211 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 EXOC3L2Q2M3D2 409 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 SPANXN2Q5MJ10 180 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 SNAP47Q5SQN1 464 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 AGAP6Q5VW22 663 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 SERPINA13PQ6UXR4 307 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 WDR53Q7Z5U6 358 aaPredicted RBP13.67□□□□□ -0.22
PRAME-214ENST00000543184 OR10G2Q8NGC3 310 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 OR4K1Q8NGD4 311 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 OR6F1Q8NGZ6 308 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 SPPL3Q8TCT6 385 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 IPCEF1Q8WWN9 437 aaPredicted RBP13.67□□□□□ -0.22
PRAME-214ENST00000543184 CLP1Q92989 425 aaKnown RBP13.67□□□□□ -0.22
PRAME-214ENST00000543184 FUBP3Q96I24 572 aaKnown RBP eCLIP13.67□□□□□ -0.22
PRAME-214ENST00000543184 AGAP4Q96P64 663 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 TRNT1Q96Q11 434 aaKnown RBP13.67□□□□□ -0.22
PRAME-214ENST00000543184 SLC32A1Q9H598 525 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 ZNF221Q9UK13 617 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 PCDHB1Q9Y5F3 818 aa13.67□□□□□ -0.22
PRAME-214ENST00000543184 SLC38A8A6NNN8 435 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 SYN3O14994 580 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 TBL1XO60907 577 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 SCN2BO60939 215 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 ETHE1O95571 254 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 GJA1P17302 382 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 CRATP43155 626 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 UGT2B15P54855 530 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 CHIT1Q13231 466 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 SLAMF1Q13291 335 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 LEXMQ3ZCV2 418 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 INO80DQ53TQ3 878 aaPredicted RBP13.66□□□□□ -0.22
PRAME-214ENST00000543184 ARMCX6Q7L4S7 300 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 ZNF605Q86T29 641 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 SLC44A2Q8IWA5 706 aaPredicted RBP13.66□□□□□ -0.22
PRAME-214ENST00000543184 APCDD1Q8J025 514 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 GPR26Q8NDV2 337 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 OR5AK3PQ8NH89 298 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 GPR151Q8TDV0 419 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 PIH1D2Q8WWB5 315 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 MYO19Q96H55 970 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 ZFYVE19Q96K21 471 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 DNMT3LQ9UJW3 386 aa13.66□□□□□ -0.22
PRAME-214ENST00000543184 RPS6KA6Q9UK32 745 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms