RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 SPIBQ01892 262 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 MGAT3Q09327 533 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 MTAPQ13126 283 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 HNRNPA0Q13151 305 aaKnown RBP9.37□□□□□ -0.91
TCF4-208ENST00000543082 MICAQ29983 383 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 HKDC1Q2TB90 917 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 WSCD2Q2TBF2 565 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 ALFQ53S48 1182 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 ZRANB3Q5FWF4 1079 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 ZNF648Q5T619 568 aaPredicted RBP9.37□□□□□ -0.91
TCF4-208ENST00000543082 MEDAGQ5VYS4 303 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 ALG1LQ6GMV1 187 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 AP3S1Q92572 193 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 PANX1Q96RD7 426 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 DOHHQ9BU89 302 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 MND1Q9BWT6 205 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 SYNDIG1Q9H7V2 258 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 ANKRA2Q9H9E1 313 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 FKBPLQ9UIM3 349 aa9.37□□□□□ -0.91
TCF4-208ENST00000543082 TRPM7Q96QT4 1865 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 PLXNA4Q9HCM2 1894 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 FAM240BA0A1B0GVZ2 78 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 PRAMEF11O60813 436 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 TSC22D2O75157 780 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 APBA3O96018 575 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 ARSBP15848 533 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 CTPS1P17812 591 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 SDC1P18827 310 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 BRCC3P46736 316 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 RGS4P49798 205 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 CTAG1AP78358 180 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 CACNB2Q08289 660 aaPredicted RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 RIPPLY1Q0D2K3 151 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 DOC2BQ14184 412 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 DSC3Q14574 896 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 SPHARQ15513 63 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 PTCHD3Q3KNS1 767 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 MS4A13Q5J8X5 152 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 TAPT1Q6NXT6 567 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 PTCHD4Q6ZW05 846 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 KIF18BQ86Y91 864 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 RASAL3Q86YV0 1011 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 UBE2J2Q8N2K1 259 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 SPPL2AQ8TCT8 520 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 SH3KBP1Q96B97 665 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 NIPSNAP1Q9BPW8 284 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 DPH2Q9BQC3 489 aaPredicted RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 ARHGAP39Q9C0H5 1083 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 SPNS1Q9H2V7 528 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 RLIMQ9NVW2 624 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 METRNQ9UJH8 293 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 TSR3Q9UJK0 312 aaKnown RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 OGDHLQ9ULD0 1010 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 NDRG2Q9UN36 371 aaKnown RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 PCDHB1Q9Y5F3 818 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 PPP2R3BQ9Y5P8 575 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 CHD5Q8TDI0 1954 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 IGLV3-10A0A075B6K4 115 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 LOC730098B7Z3J9 87 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 SMLR1H3BR10 107 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 GPR182O15218 404 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 LYRM1O43325 122 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 TLR5O60602 858 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 TPST2O60704 377 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 CSO75390 466 aaKnown RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 SLC2A2P11168 524 aaPredicted RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 ACPPP15309 386 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 EPB42P16452 691 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 ATF4P18848 351 aaPredicted RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 PRPH2P23942 346 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 PPP3R1P63098 170 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 SRSF11Q05519 484 aaKnown RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 MLLT11Q13015 90 aaPredicted RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 MFSD13AQ14CX5 517 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 EXOC3L2Q2M3D2 409 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 ASTLQ6HA08 431 aaPredicted RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 RGMBQ6NW40 437 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 TMEM65Q6PI78 240 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 KLHL17Q6TDP4 642 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 TEX261Q6UWH6 196 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 ZNF621Q6ZSS3 439 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 SCD5Q86SK9 330 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 CDH24Q86UP0 819 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 MDGA1Q8NFP4 955 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 CMTM7Q96FZ5 175 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 QRFPRQ96P65 431 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 MARVELD1Q9BSK0 173 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 TLR8Q9NR97 1041 aaKnown RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 TMEM184CQ9NVA4 438 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 NDUFAF4Q9P032 175 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 TNFRSF10DQ9UBN6 386 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 PLEKHB1Q9UF11 243 aaPredicted RBP9.36□□□□□ -0.91
TCF4-208ENST00000543082 CORO2BQ9UQ03 480 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 PCDHGB7Q9Y5F8 929 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 U3KQ87 197 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 PLXNA3P51805 1871 aa9.36□□□□□ -0.91
TCF4-208ENST00000543082 OTOFQ9HC10 1997 aa9.35□□□□□ -0.91
TCF4-208ENST00000543082 ZAR1LA6NP61 321 aa9.35□□□□□ -0.91
TCF4-208ENST00000543082 SLC9A3R1O14745 358 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms