RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 DEPDC1Q5TB30 811 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 TRIM40Q6P9F5 258 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 ZNF517Q6ZMY9 492 aaPredicted RBP11.59□□□□□ -0.55
DDX55-210ENST00000543016 DSELQ8IZU8 1212 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 CDYL2Q8N8U2 506 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 OR2L5Q8NG80 312 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 SNIP1Q8TAD8 396 aaKnown RBP11.59□□□□□ -0.55
DDX55-210ENST00000543016 DYDC1Q8WWB3 177 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 SELENOMQ8WWX9 145 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 CCT6BQ92526 530 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 GATA6Q92908 595 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 GAL3ST3Q96A11 431 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 METTL2AQ96IZ6 378 aaKnown RBP11.59□□□□□ -0.55
DDX55-210ENST00000543016 FAR2Q96K12 515 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 GBP5Q96PP8 586 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 EFHD1Q9BUP0 239 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 MS4A8Q9BY19 250 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 REXO4Q9GZR2 422 aaKnown RBP11.59□□□□□ -0.55
DDX55-210ENST00000543016 ILKAPQ9H0C8 392 aaPredicted RBP11.59□□□□□ -0.55
DDX55-210ENST00000543016 MANSC1Q9H8J5 431 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 ANKHQ9HCJ1 492 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 PRM3Q9NNZ6 103 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 DMRT3Q9NQL9 472 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 AHSPQ9NZD4 102 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 HAO1Q9UJM8 370 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 TRAF6Q9Y4K3 522 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 MDC1Q14676 2089 aaKnown RBP11.59□□□□□ -0.55
DDX55-210ENST00000543016 SPTBP11277 2137 aa11.59□□□□□ -0.55
DDX55-210ENST00000543016 C21orf140B9A014 251 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 MANBAO00462 879 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 P2RX6O15547 441 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 ALBP02768 609 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 NTRK1P04629 796 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 SMIM10L1P0DMW3 83 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 CHN1P15882 459 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 BGNP21810 368 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 IL10P22301 178 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 ALAS2P22557 587 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 SLC1A6P48664 564 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 CYP4F2P78329 520 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 HYAL2Q12891 473 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 CSTF3Q12996 717 aaKnown RBP11.58□□□□□ -0.56
DDX55-210ENST00000543016 KHDRBS2Q5VWX1 349 aaKnown RBP11.58□□□□□ -0.56
DDX55-210ENST00000543016 ZCCHC23Q6ZST2 131 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 TTLL10Q6ZVT0 673 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 RPS27LQ71UM5 84 aaKnown RBP11.58□□□□□ -0.56
DDX55-210ENST00000543016 VN1R5Q7Z5H4 357 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 DTX1Q86Y01 620 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 KCT2Q8NC54 265 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 ZNF248Q8NDW4 579 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 MDM1Q8TC05 714 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 UTP15Q8TED0 518 aaKnown RBP11.58□□□□□ -0.56
DDX55-210ENST00000543016 PMEPA1Q969W9 287 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 FKBP10Q96AY3 582 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 RGMAQ96B86 450 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 MS4A6EQ96DS6 147 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 SMIM10Q96HG1 83 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 C10orf90Q96M02 699 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 KCNC2Q96PR1 638 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 TBCDQ9BTW9 1192 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 NPLQ9BXD5 320 aaPredicted RBP11.58□□□□□ -0.56
DDX55-210ENST00000543016 DPH1Q9BZG8 443 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 SYNPO2LQ9H987 977 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 MLXIPLQ9NP71 852 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 STARD5Q9NSY2 213 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 RAP2CQ9Y3L5 183 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 ADAMTS20P59510 1910 aa11.58□□□□□ -0.56
DDX55-210ENST00000543016 A0A1B0GTL3 188 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 MAGEB17A8MXT2 336 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 C9J4A7 227 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 FFAR3O14843 346 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 GPR42O15529 346 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 RAD1O60671 282 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 SNNO75324 88 aaPredicted RBP11.57□□□□□ -0.56
DDX55-210ENST00000543016 CTSBP07858 339 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 ZNF28P17035 718 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 HK2P52789 917 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 BST1Q10588 318 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 DDX39BQ13838 428 aaKnown RBP11.57□□□□□ -0.56
DDX55-210ENST00000543016 DSG2Q14126 1118 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 NKAIN1Q4KMZ8 207 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 TOR1AIP1Q5JTV8 583 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 KANK2Q63ZY3 851 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 ZNF385CQ66K41 422 aaPredicted RBP11.57□□□□□ -0.56
DDX55-210ENST00000543016 ABHD17CQ6PCB6 329 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 RGS9BPQ6ZS82 235 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 TRIM46Q7Z4K8 759 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 SLC38A9Q8NBW4 561 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 GALNT6Q8NCL4 622 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 LRRC8CQ8TDW0 803 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 ADAMTS18Q8TE60 1221 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 ZNF75CPQ92670 426 aaPredicted RBP11.57□□□□□ -0.56
DDX55-210ENST00000543016 MOCOSQ96EN8 888 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 QRFPRQ96P65 431 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 MTERF1Q99551 399 aaKnown RBP11.57□□□□□ -0.56
DDX55-210ENST00000543016 TMEM121BQ9BXQ6 578 aaPredicted RBP11.57□□□□□ -0.56
DDX55-210ENST00000543016 GPR87Q9BY21 358 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 ZNF304Q9HCX3 659 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 LHX9Q9NQ69 397 aa11.57□□□□□ -0.56
DDX55-210ENST00000543016 ACSS2Q9NR19 701 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms