RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CREMQ03060 361 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 LRRC74AQ0VAA2 488 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 DOC2AQ14183 400 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 TRIM16LQ309B1 348 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 EEF1AKMT2Q5JPI9 291 aaKnown RBP5□□□□□ -1.61
ATPAF1-212ENST00000542495 ANXA8L1Q5VT79 327 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5□□□□□ -1.61
ATPAF1-212ENST00000542495 DPY19L3Q6ZPD9 716 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF621Q6ZSS3 439 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 GAREM2Q75VX8 874 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 UBE2Q1Q7Z7E8 422 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 GALNT10Q86SR1 603 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 THOC6Q86W42 341 aaKnown RBP5□□□□□ -1.61
ATPAF1-212ENST00000542495 HORMAD1Q86X24 394 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 LACC1Q8IV20 430 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 GPR65Q8IYL9 337 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 ENTHD1Q8IYW4 607 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 RNF175Q8N4F7 328 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF540Q8NDQ6 660 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 OR4C15Q8NGM1 316 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 OR56A3Q8NH54 315 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 GOT1L1Q8NHS2 421 aaPredicted RBP5□□□□□ -1.61
ATPAF1-212ENST00000542495 PUM2Q8TB72 1066 aaKnown RBP eCLIP5□□□□□ -1.61
ATPAF1-212ENST00000542495 CHTF18Q8WVB6 975 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 ASZ1Q8WWH4 475 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 FCGR1BQ92637 280 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 DNASE1L2Q92874 299 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 TAMM41Q96BW9 452 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 CXorf40BQ96DE9 158 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 LGALS12Q96DT0 336 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 OR4K3Q96R72 315 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 RAD9AQ99638 391 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 DPH2Q9BQC3 489 aaPredicted RBP5□□□□□ -1.61
ATPAF1-212ENST00000542495 DOHHQ9BU89 302 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 RSRP1Q9BUV0 290 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 DUSP26Q9BV47 211 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 ATG10Q9H0Y0 220 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 ABCG8Q9H221 673 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 ARMC7Q9H6L4 198 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 MRPL17Q9NRX2 175 aaKnown RBP5□□□□□ -1.61
ATPAF1-212ENST00000542495 CFAP97Q9P2B7 532 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 B4GALT6Q9UBX8 382 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 ATP6V1HQ9UI12 483 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 PSORS1C1Q9UIG5 152 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 FZD4Q9ULV1 537 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 CORO2BQ9UQ03 480 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 EXO1Q9UQ84 846 aaKnown RBP5□□□□□ -1.61
ATPAF1-212ENST00000542495 RNF6Q9Y252 685 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 PCDHGB3Q9Y5G1 929 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 PCDHGA6Q9Y5G7 932 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 A3GALT2U3KPV4 340 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 KRT87PA6NCN2 255 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 MYO1GB0I1T2 1018 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 E7EQ34 232 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 M0R082 166 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 LEFTY2O00292 366 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 RNASET2O00584 256 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TOR1BO14657 336 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 GRM6O15303 877 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SUV39H1O43463 412 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ATP6V1G1O75348 118 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 RFPL2O75678 378 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 MYO1DO94832 1006 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PARNO95453 639 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ETHE1O95571 254 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CPSF4O95639 269 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 FADS2O95864 444 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 LCKP06239 509 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CD36P16671 472 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF30P17039 623 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 GABRB1P18505 474 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PTX3P26022 381 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PSMB9P28065 219 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 GABRR2P28476 465 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CD40LGP29965 261 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 VIPR1P32241 457 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 GGT2P36268 569 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PPP5CP53041 499 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PNLIPRP1P54315 467 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 POLR2LP62875 67 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SELENOWP63302 87 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TUBA1BP68363 451 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CYP4F8P98187 520 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ACSM2AQ08AH3 577 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CDC20Q12834 499 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 GAB1Q13480 694 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CAMK2GQ13555 558 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PDE7AQ13946 482 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 RGNQ15493 299 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TBCEQ15813 527 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 INAQ16352 499 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF658BQ4V348 819 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 XKR6Q5GH73 641 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CPTPQ5TA50 214 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 AGAP7PQ5VUJ5 663 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ACSM2BQ68CK6 577 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 AGTRAPQ6RW13 159 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 GDPD4Q6W3E5 623 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TUBA1AQ71U36 451 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CCDC80Q76M96 950 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms