RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 POLE2P56282 527 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 GTF2H2Q13888 395 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 CCDC153Q494R4 210 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 TMEM35AQ53FP2 167 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 FBXO48Q5FWF7 155 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 ATP1A1-AS1Q5TC04 95 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 GTF2H2CQ6P1K8 395 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 PDSS2Q86YH6 399 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 DTWD1Q8N5C7 304 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 PTGR2Q8N8N7 351 aaPredicted RBP13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 EXD3Q8N9H8 876 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 OR2L5Q8NG80 312 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 OR7G3Q8NG95 312 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 OR51Q1Q8NH59 317 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 SLC39A7Q92504 469 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 GAL3ST3Q96A11 431 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 REPS1Q96D71 796 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 MACROD1Q9BQ69 325 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 NPLQ9BXD5 320 aaPredicted RBP13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 ING2Q9H160 280 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 TMEM216Q9P0N5 145 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 PCTPQ9UKL6 214 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 NAALAD2Q9Y3Q0 740 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 PCDHGB7Q9Y5F8 929 aa13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 PCDHGA9Q9Y5G4 932 aaKnown RBP13.04□□□□□ -0.32
TNFSF13B-206ENST00000542136 LOC400499M0QZD8 3231 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 A0A1W2PPM1 405 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 IDSB3KWA1 339 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 MKRN2OSH3BPM6 223 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 GLRA3O75311 464 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 CLDN9O95484 217 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 SERPIND1P05546 499 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 ZNF888P0CJ79 500 aaPredicted RBP13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 IL1RNP18510 177 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 IMPDH1P20839 514 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 ATP5F1P24539 256 aaPredicted RBP13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 EEF1DP29692 281 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 TSFMP43897 325 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 HERVK_113P63132 956 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 SLC18A2Q05940 514 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 TGM3Q08188 693 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 IFFO1Q0D2I5 559 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 KCNAB2Q13303 367 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 DEFB134Q4QY38 66 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 VWA2Q5GFL6 755 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 TCTN3Q6NUS6 607 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 CHSY3Q70JA7 882 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 GOLGA7Q7Z5G4 137 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 VN1R5Q7Z5H4 357 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 PPP1R32Q7Z5V6 425 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 CROCCP2Q86T23 111 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 CYP4X1Q8N118 509 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 METTL27Q8N6F8 245 aaPredicted RBP13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 MYRIPQ8NFW9 859 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 RDH11Q8TC12 318 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 EPS8L3Q8TE67 593 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 ZNF473Q8WTR7 871 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 MS4A6EQ96DS6 147 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 PHF21BQ96EK2 531 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 CRB3Q9BUF7 120 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 ERVK-6Q9BXR3 956 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 ROGDIQ9GZN7 287 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 ACTR8Q9H981 624 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 MLXIPLQ9NP71 852 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 MKS1Q9NXB0 559 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 P4HTMQ9NXG6 502 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 C3orf18Q9UK00 162 aa13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 V9GYY5 206 aaPredicted RBP13.03□□□□□ -0.32
TNFSF13B-206ENST00000542136 ZFYVE26Q68DK2 2539 aa13.02□□□□□ -0.32
TNFSF13B-206ENST00000542136 LOC102723996A0A087X1L8 192 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 A8MT66 165 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 SGK494L7N484 410 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 FOXE1O00358 373 aaPredicted RBP13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 SOCS6O14544 535 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 DLX3O60479 287 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 SIX3O95343 332 aaPredicted RBP13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 TBX6O95947 436 aaPredicted RBP13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 OTCP00480 354 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 RPS17P08708 135 aaKnown RBP13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 FAM87AP0C7U9 286 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 KRT4P19013 534 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 PTX3P26022 381 aaPredicted RBP13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 OTX2P32243 289 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 XCR1P46094 333 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 SLCO1A2P46721 670 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 EMP2P54851 167 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 SNRPNP63162 240 aaKnown RBP13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 ATP1A4Q13733 1029 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 GGTA1PQ4G0N0 100 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 DCAF10Q5QP82 559 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 FAM69BQ5VUD6 431 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 TMEM205Q6UW68 189 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 KIRREL2Q6UWL6 708 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 PRSS41Q7RTY9 318 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 LAPTM4BQ86VI4 370 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 HPS6Q86YV9 775 aa13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 ZC3H7AQ8IWR0 971 aaKnown RBP13.02□□□□□ -0.33
TNFSF13B-206ENST00000542136 CLEC1AQ8NC01 280 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms