RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 DNAJC11Q9NVH1 559 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 AURKCQ9UQB9 309 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 OR2W1Q9Y3N9 320 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 SCN4AP35499 1836 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 C4BP0C0L5 1744 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 TNRC18O15417 2968 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-217ENST00000541578 PALLDQ8WX93 1383 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 KCPQ6ZWJ8 1503 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 USP54Q70EL1 1684 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 CASP8AP2Q9UKL3 1982 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 F8VVB4 439 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 F8VWA3 439 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 MPHOSPH10O00566 681 aaKnown RBP3.91□□□□□ -1.78
SNHG1-217ENST00000541578 RASGRF2O14827 1237 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 ARPC2O15144 300 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 SSX5O60225 188 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 RNASEH1O60930 286 aaKnown RBP3.91□□□□□ -1.78
SNHG1-217ENST00000541578 WDPCPO95876 746 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 MT-ATP6P00846 226 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 GMPSP49915 693 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-217ENST00000541578 ATXN3P54252 364 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-217ENST00000541578 STARD6P59095 220 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 TUBA1BP68363 451 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 MAT1AQ00266 395 aaKnown RBP3.91□□□□□ -1.78
SNHG1-217ENST00000541578 CACNG1Q06432 222 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 ARHGAP1Q07960 439 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 ABRQ12979 859 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 MFAP5Q13361 173 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 TAF13Q15543 124 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 INAQ16352 499 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 KIF19Q2TAC6 998 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 FAM171BQ6P995 826 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 CTR9Q6PD62 1173 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 PLXDC2Q6UX71 529 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 Q6ZTC4 211 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 SMG6Q86US8 1419 aaKnown RBP3.91□□□□□ -1.78
SNHG1-217ENST00000541578 NR2C2APQ86WQ0 139 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 TMEM126BQ8IUX1 230 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.91□□□□□ -1.783e-7■■■■■ 36.2
SNHG1-217ENST00000541578 KLHDC8AQ8IYD2 350 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 CRYBG2Q8N1P7 616 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 KDM8Q8N371 416 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 NEXN-AS1Q8NBZ9 246 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 LEMD2Q8NC56 503 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 CCNYQ8ND76 341 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 NPEPL1Q8NDH3 523 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 OR13J1Q8NGT2 312 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 EXOC6Q8TAG9 804 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 SLC20A1Q8WUM9 679 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 IRGQQ8WZA9 623 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 FIG4Q92562 907 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 COG3Q96JB2 828 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 SGK494Q96LW2 274 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 DUX5Q96PT3 197 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 NOTCH4Q99466 2003 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 PKP2Q99959 881 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 ZNF559Q9BR84 538 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 TRMT61BQ9BVS5 477 aaKnown RBP3.91□□□□□ -1.78
SNHG1-217ENST00000541578 SPRY4Q9C004 299 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 VN1R1Q9GZP7 353 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 S1PR5Q9H228 398 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 DPH5Q9H2P9 285 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 FKRPQ9H9S5 495 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 UBTD1Q9HAC8 227 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 ZCCHC3Q9NUD5 404 aaKnown RBP3.91□□□□□ -1.78
SNHG1-217ENST00000541578 OCIAD1Q9NX40 245 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 TMOD3Q9NYL9 352 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 PTTG2Q9NZH5 202 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 SLC12A6Q9UHW9 1150 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 DAPK2Q9UIK4 370 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 WDR83OSQ9Y284 106 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 HBS1LQ9Y450 684 aaKnown RBP3.91□□□□□ -1.78
SNHG1-217ENST00000541578 PCDHAC2Q9Y5I4 1007 aa3.91□□□□□ -1.78
SNHG1-217ENST00000541578 DOT1LQ8TEK3 1739 aa3.9□□□□□ -1.78
SNHG1-217ENST00000541578 IGLV5-37A0A075B6J1 123 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 IGLV5-52A0A0A0MRZ9 124 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 A0A0G2JNG1 304 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 A0A1B0GUV1 79 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 ANKRD61A6NGH8 418 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 ZNF197O14709 1029 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 TEX28O15482 410 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 GMNNO75496 209 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 ATP6AP2O75787 350 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 PDE9AO76083 593 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 AREGP15514 252 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 NR1D1P20393 614 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 AHCYP23526 432 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 EPHA2P29317 976 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 SFNP31947 248 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 SFTPDP35247 375 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 MAGEB1P43366 347 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 ASMTP46597 345 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 RPL21P46778 160 aaKnown RBP3.9□□□□□ -1.79
SNHG1-217ENST00000541578 NR0B1P51843 470 aaKnown RBP3.9□□□□□ -1.79
SNHG1-217ENST00000541578 UCP2P55851 309 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 BNC1Q01954 994 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 MBTD1Q05BQ5 628 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 ZNF415Q09FC8 603 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 HYAL1Q12794 435 aa3.9□□□□□ -1.79
SNHG1-217ENST00000541578 TSTA3Q13630 321 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms